RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 RWDD1Q9H446 243 aaPredicted RBP7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 DCCP43146 1447 aa7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 GNAT3A8MTJ3 354 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 MCM10Q7L590 875 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 TSPYL6Q8N831 410 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 C8orf58Q8NAV2 365 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 LTV1Q96GA3 475 aaPredicted RBP7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 BABAM1Q9NWV8 329 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 PCDHB13Q9Y5F0 798 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 NALCNQ8IZF0 1738 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 KIAA0232Q92628 1395 aa7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 ELL2O00472 640 aaPredicted RBP7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
GTF3C3-202ENST00000409364 USP19O94966 1318 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 NPHP3Q7Z494 1330 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 PIK3C2AO00443 1686 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 MSH6P52701 1360 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 ZBTB22O15209 634 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 IGHDP01880 384 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 ITPRIPQ8IWB1 547 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 API5Q9BZZ5 524 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 TNNQ9UQP3 1299 aa7.97□□□□□ -1.13
GTF3C3-202ENST00000409364 MST1RQ04912 1400 aa7.96□□□□□ -1.13
GTF3C3-202ENST00000409364 PDE4AP27815 886 aa7.96□□□□□ -1.14
GTF3C3-202ENST00000409364 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
GTF3C3-202ENST00000409364 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
GTF3C3-202ENST00000409364 PEAK1Q9H792 1746 aa7.96□□□□□ -1.14
GTF3C3-202ENST00000409364 CRB1P82279 1406 aa7.96□□□□□ -1.14
GTF3C3-202ENST00000409364 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 RGS20O76081 388 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 PRKCSHP14314 528 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 TAF7Q15545 349 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 PLEKHO1Q53GL0 409 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 TMEM57Q8N5G2 664 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 L3MBTL3Q96JM7 780 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 CHMP4AQ9BY43 222 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 BACH2Q9BYV9 841 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 IRX2Q9BZI1 471 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 ZBTB40Q9NUA8 1239 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 TSPYL4Q9UJ04 414 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 SOS1Q07889 1333 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 HOXB1P14653 301 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 HDAC1Q13547 482 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 ARXQ96QS3 562 aa7.95□□□□□ -1.14
GTF3C3-202ENST00000409364 USP54Q70EL1 1684 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 STRCP1A6NGW2 1772 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 IL17REQ8NFR9 667 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 ANKRD24Q8TF21 1146 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
GTF3C3-202ENST00000409364 RGPD1P0DJD0 1748 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 AKAP4Q5JQC9 854 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 USHBP1Q8N6Y0 703 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 PTPRCP08575 1304 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 NFAT5O94916 1531 aa7.93□□□□□ -1.14
GTF3C3-202ENST00000409364 ZC3H6P61129 1189 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 FAM161AQ3B820 660 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 SPATA31A3Q5VYP0 1347 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 ZNF335Q9H4Z2 1342 aaPredicted RBP7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 ABCC4O15439 1325 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 SLIT3O75094 1523 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 ANP32AP39687 249 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 RGS3P49796 1198 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 C1orf141Q5JVX7 400 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 CCDC30Q5VVM6 783 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 INTS3Q68E01 1043 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 LRRC59Q96AG4 307 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 STK31Q9BXU1 1019 aa7.92□□□□□ -1.14
GTF3C3-202ENST00000409364 KIF1AQ12756 1690 aa7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 KRT24Q2M2I5 525 aa7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 ZNF530Q6P9A1 599 aaPredicted RBP7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 BRINP3Q76B58 766 aa7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 ZNF710Q8N1W2 664 aa7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 PDZRN3Q9UPQ7 1066 aa7.91□□□□□ -1.14
GTF3C3-202ENST00000409364 CEMIPQ8WUJ3 1361 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 TEFQ10587 303 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 SKAP1Q86WV1 359 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 SMC5Q8IY18 1101 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 RAPGEF4Q8WZA2 1011 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.9□□□□□ -1.142e-7■■■□□ 16.9
GTF3C3-202ENST00000409364 HCSTQ9UBK5 93 aa7.9□□□□□ -1.14
GTF3C3-202ENST00000409364 HOXB7P09629 217 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 LGR6Q9HBX8 967 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 NLRP2Q9NX02 1062 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 NCAPD2Q15021 1401 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 TNS3Q68CZ2 1445 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 RNMTO43148 476 aaKnown RBP7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 CCT4P50991 539 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 252.1 ms