RNA–Protein interactions for RNA: ENST00000405557.5

POLR2F-202, Transcript of RNA polymerase II subunit F, humanhuman

TSL 5 BASIC

Gene POLR2F, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-202ENST00000405557 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
POLR2F-202ENST00000405557 PLSCR1O15162 318 aa17.42■□□□□ 0.38
POLR2F-202ENST00000405557 CABP4P57796 275 aa17.42■□□□□ 0.38
POLR2F-202ENST00000405557 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
POLR2F-202ENST00000405557 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
POLR2F-202ENST00000405557 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
POLR2F-202ENST00000405557 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
POLR2F-202ENST00000405557 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
POLR2F-202ENST00000405557 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
POLR2F-202ENST00000405557 RREB1Q92766 1687 aa17.41■□□□□ 0.38
POLR2F-202ENST00000405557 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
POLR2F-202ENST00000405557 PROM2Q8N271 834 aa17.4■□□□□ 0.38
POLR2F-202ENST00000405557 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
POLR2F-202ENST00000405557 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
POLR2F-202ENST00000405557 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
POLR2F-202ENST00000405557 BAG6P46379 1132 aa17.39■□□□□ 0.37
POLR2F-202ENST00000405557 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
POLR2F-202ENST00000405557 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
POLR2F-202ENST00000405557 TEFQ10587 303 aa17.37■□□□□ 0.37
POLR2F-202ENST00000405557 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
POLR2F-202ENST00000405557 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
POLR2F-202ENST00000405557 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
POLR2F-202ENST00000405557 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
POLR2F-202ENST00000405557 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
POLR2F-202ENST00000405557 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
POLR2F-202ENST00000405557 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
POLR2F-202ENST00000405557 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
POLR2F-202ENST00000405557 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
POLR2F-202ENST00000405557 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
POLR2F-202ENST00000405557 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
POLR2F-202ENST00000405557 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
POLR2F-202ENST00000405557 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
POLR2F-202ENST00000405557 KCNQ3O43525 872 aa17.34■□□□□ 0.37
POLR2F-202ENST00000405557 SLC4A9Q96Q91 983 aa17.34■□□□□ 0.37
POLR2F-202ENST00000405557 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
POLR2F-202ENST00000405557 KCNQ4P56696 695 aa17.33■□□□□ 0.36
POLR2F-202ENST00000405557 WWC1Q8IX03 1113 aa17.33■□□□□ 0.36
POLR2F-202ENST00000405557 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
POLR2F-202ENST00000405557 TJP1Q07157 1748 aa17.33■□□□□ 0.36
POLR2F-202ENST00000405557 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
POLR2F-202ENST00000405557 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
POLR2F-202ENST00000405557 C5P01031 1676 aa17.32■□□□□ 0.36
POLR2F-202ENST00000405557 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
POLR2F-202ENST00000405557 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
POLR2F-202ENST00000405557 SIK1P57059 783 aa17.31■□□□□ 0.36
POLR2F-202ENST00000405557 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
POLR2F-202ENST00000405557 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
POLR2F-202ENST00000405557 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
POLR2F-202ENST00000405557 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
POLR2F-202ENST00000405557 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
POLR2F-202ENST00000405557 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
POLR2F-202ENST00000405557 CHL1O00533 1208 aa17.29■□□□□ 0.36
POLR2F-202ENST00000405557 ITPK1Q13572 414 aa17.29■□□□□ 0.36
POLR2F-202ENST00000405557 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
POLR2F-202ENST00000405557 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
POLR2F-202ENST00000405557 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
POLR2F-202ENST00000405557 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
POLR2F-202ENST00000405557 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
POLR2F-202ENST00000405557 CFAP44Q96MT7 982 aa17.27■□□□□ 0.36
POLR2F-202ENST00000405557 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
POLR2F-202ENST00000405557 C4BP0C0L5 1744 aa17.27■□□□□ 0.35
POLR2F-202ENST00000405557 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
POLR2F-202ENST00000405557 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
POLR2F-202ENST00000405557 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
POLR2F-202ENST00000405557 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
POLR2F-202ENST00000405557 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
POLR2F-202ENST00000405557 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
POLR2F-202ENST00000405557 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
POLR2F-202ENST00000405557 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
POLR2F-202ENST00000405557 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
POLR2F-202ENST00000405557 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
POLR2F-202ENST00000405557 IL16Q14005 1332 aa17.24■□□□□ 0.35
POLR2F-202ENST00000405557 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
POLR2F-202ENST00000405557 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
POLR2F-202ENST00000405557 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
POLR2F-202ENST00000405557 AKT1S1Q96B36 256 aa17.24■□□□□ 0.35
POLR2F-202ENST00000405557 UBR3Q6ZT12 1888 aa17.23■□□□□ 0.35
POLR2F-202ENST00000405557 GNAI1P63096 354 aa17.23■□□□□ 0.35
POLR2F-202ENST00000405557 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
POLR2F-202ENST00000405557 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
POLR2F-202ENST00000405557 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
POLR2F-202ENST00000405557 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
POLR2F-202ENST00000405557 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
POLR2F-202ENST00000405557 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
POLR2F-202ENST00000405557 USP16Q9Y5T5 823 aa17.21■□□□□ 0.35
POLR2F-202ENST00000405557 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
POLR2F-202ENST00000405557 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
POLR2F-202ENST00000405557 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
POLR2F-202ENST00000405557 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
POLR2F-202ENST00000405557 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
POLR2F-202ENST00000405557 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
POLR2F-202ENST00000405557 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
POLR2F-202ENST00000405557 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
POLR2F-202ENST00000405557 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
POLR2F-202ENST00000405557 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms