RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CDC45O75419 566 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 GNAI2P04899 355 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 AMOTQ4VCS5 1084 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 TBC1D9Q6ZT07 1266 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
CHTOP-205ENST00000403433 MST1RQ04912 1400 aa22.22■■□□□ 1.15
CHTOP-205ENST00000403433 EIF5BO60841 1220 aaKnown RBP22.21■■□□□ 1.15
CHTOP-205ENST00000403433 GNAI3P08754 354 aa22.21■■□□□ 1.15
CHTOP-205ENST00000403433 TTC22Q5TAA0 569 aa22.21■■□□□ 1.15
CHTOP-205ENST00000403433 GSPT1P15170 499 aaKnown RBP22.21■■□□□ 1.15
CHTOP-205ENST00000403433 TEFQ10587 303 aa22.2■■□□□ 1.14
CHTOP-205ENST00000403433 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
CHTOP-205ENST00000403433 OVOS2A0A0G2JMS6 1433 aa22.2■■□□□ 1.14
CHTOP-205ENST00000403433 HOXB7P09629 217 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 HSCBQ8IWL3 235 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 CHMP4AQ9BY43 222 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 RGPD5Q99666 1765 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 APBB1O00213 710 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 ATF3P18847 181 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 EIF4A1P60842 406 aaKnown RBP22.19■■□□□ 1.14
CHTOP-205ENST00000403433 ANTXR1Q9H6X2 564 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 PXDNQ92626 1479 aa22.19■■□□□ 1.14
CHTOP-205ENST00000403433 DCCP43146 1447 aa22.18■■□□□ 1.14
CHTOP-205ENST00000403433 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
CHTOP-205ENST00000403433 FRAT2O75474 233 aaPredicted RBP22.18■■□□□ 1.14
CHTOP-205ENST00000403433 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
CHTOP-205ENST00000403433 SMARCA5O60264 1052 aaPredicted RBP22.17■■□□□ 1.14
CHTOP-205ENST00000403433 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
CHTOP-205ENST00000403433 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
CHTOP-205ENST00000403433 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
CHTOP-205ENST00000403433 OTUD7AQ8TE49 926 aaPredicted RBP22.16■■□□□ 1.14
CHTOP-205ENST00000403433 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
CHTOP-205ENST00000403433 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.14
CHTOP-205ENST00000403433 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.13
CHTOP-205ENST00000403433 AXIN2Q9Y2T1 843 aa22.14■■□□□ 1.13
CHTOP-205ENST00000403433 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
CHTOP-205ENST00000403433 SNX21Q969T3 373 aa22.13■■□□□ 1.13
CHTOP-205ENST00000403433 PHAXQ9H814 394 aaKnown RBP22.13■■□□□ 1.13
CHTOP-205ENST00000403433 SIPA1L3O60292 1781 aaPredicted RBP22.13■■□□□ 1.13
CHTOP-205ENST00000403433 ERBB3P21860 1342 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 CASC1Q6TDU7 716 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 KCNQ3O43525 872 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 UBTFL1P0CB47 393 aaPredicted RBP22.12■■□□□ 1.13
CHTOP-205ENST00000403433 ATP8B2P98198 1209 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
CHTOP-205ENST00000403433 LRRFIP2Q9Y608 721 aaKnown RBP22.12■■□□□ 1.13
CHTOP-205ENST00000403433 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
CHTOP-205ENST00000403433 SPRYD3Q8NCJ5 442 aa22.11■■□□□ 1.13
CHTOP-205ENST00000403433 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
CHTOP-205ENST00000403433 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
CHTOP-205ENST00000403433 SDSP20132 328 aa22.1■■□□□ 1.13
CHTOP-205ENST00000403433 USP44Q9H0E7 712 aa22.1■■□□□ 1.13
CHTOP-205ENST00000403433 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
CHTOP-205ENST00000403433 SRCIN1Q9C0H9 1055 aa22.09■■□□□ 1.13
CHTOP-205ENST00000403433 PNMA6EA0A0J9YXQ4 647 aa22.08■■□□□ 1.13
CHTOP-205ENST00000403433 KIF2CQ99661 725 aa22.08■■□□□ 1.13
CHTOP-205ENST00000403433 OSBPL3Q9H4L5 887 aa22.08■■□□□ 1.13
CHTOP-205ENST00000403433 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.12
CHTOP-205ENST00000403433 GSE1Q14687 1217 aa22.08■■□□□ 1.12
CHTOP-205ENST00000403433 CADPS2Q86UW7 1296 aa22.08■■□□□ 1.12
CHTOP-205ENST00000403433 IBTKQ9P2D0 1353 aaPredicted RBP22.07■■□□□ 1.12
CHTOP-205ENST00000403433 CHMP5Q9NZZ3 219 aa22.07■■□□□ 1.12
CHTOP-205ENST00000403433 CRYBG1Q9Y4K1 1723 aa22.07■■□□□ 1.12
CHTOP-205ENST00000403433 TNS3Q68CZ2 1445 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 PDE1AP54750 535 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 DNAAF4Q8WXU2 420 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 COL18A1P39060 1754 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 ABCC6O95255 1503 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
CHTOP-205ENST00000403433 RAPGEF4Q8WZA2 1011 aa22.06■■□□□ 1.12
CHTOP-205ENST00000403433 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
CHTOP-205ENST00000403433 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
CHTOP-205ENST00000403433 TUBGCP6Q96RT7 1819 aa22.05■■□□□ 1.12
CHTOP-205ENST00000403433 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
CHTOP-205ENST00000403433 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
CHTOP-205ENST00000403433 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
CHTOP-205ENST00000403433 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
CHTOP-205ENST00000403433 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
CHTOP-205ENST00000403433 BEND3Q5T5X7 828 aa22.03■■□□□ 1.12
CHTOP-205ENST00000403433 HEG1Q9ULI3 1381 aa22.02■■□□□ 1.12
CHTOP-205ENST00000403433 SALL3Q9BXA9 1300 aa22.02■■□□□ 1.12
CHTOP-205ENST00000403433 ADCY9O60503 1353 aa22.02■■□□□ 1.12
CHTOP-205ENST00000403433 ANXA1P04083 346 aa22.02■■□□□ 1.11
CHTOP-205ENST00000403433 TATP17735 454 aaPredicted RBP22.02■■□□□ 1.11
CHTOP-205ENST00000403433 MX1P20591 662 aa22.02■■□□□ 1.11
CHTOP-205ENST00000403433 SSH3Q8TE77 659 aa22.02■■□□□ 1.11
CHTOP-205ENST00000403433 REC8O95072 547 aa22.01■■□□□ 1.11
CHTOP-205ENST00000403433 CSB-PGBD3P0DP91 1061 aa22■■□□□ 1.11
CHTOP-205ENST00000403433 USP26Q9BXU7 913 aa22■■□□□ 1.11
CHTOP-205ENST00000403433 SPG7Q9UQ90 795 aa22■■□□□ 1.11
CHTOP-205ENST00000403433 RABEP1Q15276 862 aa22■■□□□ 1.11
CHTOP-205ENST00000403433 MEGF6O75095 1541 aa21.99■■□□□ 1.11
CHTOP-205ENST00000403433 K7ELQ4 463 aaPredicted RBP21.99■■□□□ 1.11
CHTOP-205ENST00000403433 RAB11FIP3O75154 756 aa21.99■■□□□ 1.11
CHTOP-205ENST00000403433 POLA2Q14181 598 aa21.99■■□□□ 1.11
CHTOP-205ENST00000403433 PPP1R42Q7Z4L9 355 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms