RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 HAP1P54257 671 aaPredicted RBP5.37□□□□□ -1.55
SMC6-203ENST00000402989 AIMP1Q12904 312 aaKnown RBP5.37□□□□□ -1.55
SMC6-203ENST00000402989 MCTP1Q6DN14 999 aa5.37□□□□□ -1.55
SMC6-203ENST00000402989 KIF2CQ99661 725 aa5.37□□□□□ -1.55
SMC6-203ENST00000402989 LGR6Q9HBX8 967 aa5.37□□□□□ -1.55
SMC6-203ENST00000402989 CHD2O14647 1828 aaKnown RBP5.37□□□□□ -1.55
SMC6-203ENST00000402989 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.37□□□□□ -1.55
SMC6-203ENST00000402989 PKP1Q13835 747 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 IL17REQ8NFR9 667 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 TEFQ10587 303 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 CCDC30Q5VVM6 783 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 ZNF530Q6P9A1 599 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 RPAP2Q8IXW5 612 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 KLHL34Q8N239 644 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 ZGPATQ8N5A5 531 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 GBP4Q96PP9 640 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 UPF3BQ9BZI7 483 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 PHF8Q9UPP1 1060 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 CCDC9Q9Y3X0 531 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 PLEKHG1Q9ULL1 1385 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 RGPD8O14715 1765 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 SURF6O75683 361 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 UBTFL1P0CB47 393 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 XRCC6P12956 609 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMC6-203ENST00000402989 NEK4P51957 841 aa5.36□□□□□ -1.55
SMC6-203ENST00000402989 BRPF1P55201 1214 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 ZC3H6P61129 1189 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 DDX49Q9Y6V7 483 aaKnown RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 CEP170BQ9Y4F5 1589 aaPredicted RBP5.36□□□□□ -1.55
SMC6-203ENST00000402989 SBNO1A3KN83 1393 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 OVOS2A0A0J9YW53 1432 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 DDX11L8A8MPP1 907 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 PIP4K2AP48426 406 aaPredicted RBP5.35□□□□□ -1.55
SMC6-203ENST00000402989 OVOS2Q6IE36 1432 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 STRCQ7RTU9 1775 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 PTPRCP08575 1304 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 CCT4P50991 539 aaKnown RBP5.35□□□□□ -1.55
SMC6-203ENST00000402989 PDE1AP54750 535 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 JARID2Q92833 1246 aaPredicted RBP5.35□□□□□ -1.55
SMC6-203ENST00000402989 DDX17Q92841 729 aaKnown RBP5.35□□□□□ -1.55
SMC6-203ENST00000402989 NBPF4Q96M43 638 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 ORAI2Q96SN7 254 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 LRRCC1Q9C099 1032 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 CHPF2Q9P2E5 772 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 PEAK1Q9H792 1746 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 STRCP1A6NGW2 1772 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 GOLGA6L22H0YM25 854 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 TAF7Q15545 349 aaPredicted RBP5.35□□□□□ -1.55
SMC6-203ENST00000402989 TTC21AQ8NDW8 1320 aa5.35□□□□□ -1.55
SMC6-203ENST00000402989 ATP10DQ9P241 1426 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 MON2Q7Z3U7 1717 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 PRAMEF22A3QJZ6 481 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 SRGAP3O43295 1099 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 UNC5CLQ8IV45 518 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 USP26Q9BXU7 913 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 RGS12O14924 1447 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 CRB1P82279 1406 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 PI4KAP2A4QPH2 592 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 ERC2O15083 957 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 ST18O60284 1047 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 MX1P20591 662 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 CAVIN1Q6NZI2 390 aaKnown RBP5.34□□□□□ -1.55
SMC6-203ENST00000402989 PI4KAP1Q8N8J0 262 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 SIRT1Q96EB6 747 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 IGSF1Q8N6C5 1336 aa5.34□□□□□ -1.55
SMC6-203ENST00000402989 REC8O95072 547 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 GNAI3P08754 354 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 RABEP1Q15276 862 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 PPP1R42Q7Z4L9 355 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 SNX21Q969T3 373 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 SIL1Q9H173 461 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 ARHGEF10O15013 1369 aa5.34□□□□□ -1.56
SMC6-203ENST00000402989 TECPR2O15040 1411 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 BTBD11A6QL63 1104 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 PRPF40AO75400 957 aaKnown RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 NBPF7P0C2Y1 421 aaPredicted RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 CSB-PGBD3P0DP91 1061 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 MYL6BP14649 208 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 SLC39A6Q13433 755 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 C1orf141Q5JVX7 400 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 SRCIN1Q9C0H9 1055 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 RRAGDQ9NQL2 400 aaPredicted RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 RBM27Q9P2N5 1060 aaKnown RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 PALD1Q9ULE6 856 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 MAP3K5Q99683 1374 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 RAB3GAP1Q15042 981 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 GRPEL1Q9HAV7 217 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 NLRP2Q9NX02 1062 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 PA2G4Q9UQ80 394 aaKnown RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 KIAA0232Q92628 1395 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 BAG4O95429 457 aaKnown RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 CWF19L2Q2TBE0 894 aaKnown RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 ANKLE2Q86XL3 938 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms