RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PHF14O94880 888 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
HPS4-203ENST00000402105 CCDC83Q8IWF9 413 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 PTCH1Q13635 1447 aa11.07□□□□□ -0.64
HPS4-203ENST00000402105 BRD1O95696 1058 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
HPS4-203ENST00000402105 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 SRCIN1Q9C0H9 1055 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 IL25Q9H293 177 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 CHL1O00533 1208 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 ZNF500O60304 480 aaPredicted RBP11.06□□□□□ -0.64
HPS4-203ENST00000402105 TCEANC2Q96MN5 208 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
HPS4-203ENST00000402105 FLIIQ13045 1269 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
HPS4-203ENST00000402105 KIAA1210Q9ULL0 1709 aa11.06□□□□□ -0.64
HPS4-203ENST00000402105 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
HPS4-203ENST00000402105 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
HPS4-203ENST00000402105 FOSBP53539 338 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 CASTP20810 708 aaKnown RBP11.05□□□□□ -0.64
HPS4-203ENST00000402105 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 MCM2P49736 904 aa11.05□□□□□ -0.64
HPS4-203ENST00000402105 NOLC1Q14978 699 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-203ENST00000402105 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
HPS4-203ENST00000402105 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
HPS4-203ENST00000402105 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
HPS4-203ENST00000402105 ADGRB2O60241 1585 aa11.04□□□□□ -0.64
HPS4-203ENST00000402105 DNM1Q05193 864 aaKnown RBP11.04□□□□□ -0.64
HPS4-203ENST00000402105 HS1BP3Q53T59 392 aa11.04□□□□□ -0.64
HPS4-203ENST00000402105 PHAXQ9H814 394 aaKnown RBP11.04□□□□□ -0.64
HPS4-203ENST00000402105 PTPRCP08575 1304 aa11.04□□□□□ -0.64
HPS4-203ENST00000402105 STK3Q13188 491 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 MED14O60244 1454 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
HPS4-203ENST00000402105 GNAI3P08754 354 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 AK2P54819 239 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 CKAP2LQ8IYA6 745 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 CAMSAP1Q5T5Y3 1602 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 ZFYVE9O95405 1425 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 DYNC1I1O14576 645 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 PRPF40BQ6NWY9 871 aaKnown RBP11.03□□□□□ -0.64
HPS4-203ENST00000402105 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
HPS4-203ENST00000402105 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.64
HPS4-203ENST00000402105 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.64
HPS4-203ENST00000402105 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.64
HPS4-203ENST00000402105 VWDEQ8N2E2 1590 aa11.02□□□□□ -0.64
HPS4-203ENST00000402105 STX6O43752 255 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 SYT1P21579 422 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.65
HPS4-203ENST00000402105 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
HPS4-203ENST00000402105 PIK3R4Q99570 1358 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
HPS4-203ENST00000402105 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 HDGFL1Q5TGJ6 251 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 CCDC30Q5VVM6 783 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 ACEP12821 1306 aa11.02□□□□□ -0.65
HPS4-203ENST00000402105 INO80Q9ULG1 1556 aaPredicted RBP11.01□□□□□ -0.65
HPS4-203ENST00000402105 DEPDC5O75140 1603 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 A0A0U1RQG5 324 aaPredicted RBP11.01□□□□□ -0.65
HPS4-203ENST00000402105 GJB2P29033 226 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 MAP3K19Q56UN5 1328 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 ABCC3O15438 1527 aa11.01□□□□□ -0.65
HPS4-203ENST00000402105 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
HPS4-203ENST00000402105 LARGE1O95461 756 aa11□□□□□ -0.65
HPS4-203ENST00000402105 NLRP6P59044 892 aa11□□□□□ -0.65
HPS4-203ENST00000402105 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
HPS4-203ENST00000402105 MCM5P33992 734 aa11□□□□□ -0.65
HPS4-203ENST00000402105 TAF7Q15545 349 aaPredicted RBP11□□□□□ -0.65
HPS4-203ENST00000402105 KIF3AQ9Y496 699 aa11□□□□□ -0.65
HPS4-203ENST00000402105 SIL1Q9H173 461 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
HPS4-203ENST00000402105 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 TTC21BQ7Z4L5 1316 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 CNTROBQ8N137 903 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 PDRG1Q9NUG6 133 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 LIMCH1Q9UPQ0 1083 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 KIDINS220Q9ULH0 1771 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 PTPRMP28827 1452 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 MYO3AQ8NEV4 1616 aa10.99□□□□□ -0.65
HPS4-203ENST00000402105 NPHP1O15259 732 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms