RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.64□□□□□ -0.55
BRCC3-206ENST00000399042 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
BRCC3-206ENST00000399042 TNS2Q63HR2 1409 aa11.64□□□□□ -0.55
BRCC3-206ENST00000399042 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
BRCC3-206ENST00000399042 MARCH10Q8NA82 808 aaPredicted RBP11.64□□□□□ -0.55
BRCC3-206ENST00000399042 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
BRCC3-206ENST00000399042 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
BRCC3-206ENST00000399042 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
BRCC3-206ENST00000399042 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
BRCC3-206ENST00000399042 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
BRCC3-206ENST00000399042 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
BRCC3-206ENST00000399042 GLI3P10071 1580 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
BRCC3-206ENST00000399042 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
BRCC3-206ENST00000399042 PARP4Q9UKK3 1724 aaKnown RBP11.61□□□□□ -0.55
BRCC3-206ENST00000399042 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
BRCC3-206ENST00000399042 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-206ENST00000399042 TAF7Q15545 349 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-206ENST00000399042 WDR63Q8IWG1 891 aa11.61□□□□□ -0.55
BRCC3-206ENST00000399042 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
BRCC3-206ENST00000399042 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
BRCC3-206ENST00000399042 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
BRCC3-206ENST00000399042 GNAI1P63096 354 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 SLC52A2Q9HAB3 445 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
BRCC3-206ENST00000399042 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
BRCC3-206ENST00000399042 RGS12O14924 1447 aa11.59□□□□□ -0.55
BRCC3-206ENST00000399042 E9PSI1 815 aa11.58□□□□□ -0.56
BRCC3-206ENST00000399042 TRIM37O94972 964 aa11.58□□□□□ -0.56
BRCC3-206ENST00000399042 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
BRCC3-206ENST00000399042 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
BRCC3-206ENST00000399042 KCNQ2O43526 872 aa11.57□□□□□ -0.56
BRCC3-206ENST00000399042 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
BRCC3-206ENST00000399042 IL16Q14005 1332 aa11.57□□□□□ -0.56
BRCC3-206ENST00000399042 SLC39A6Q13433 755 aa11.56□□□□□ -0.56
BRCC3-206ENST00000399042 PIGBQ92521 554 aa11.56□□□□□ -0.56
BRCC3-206ENST00000399042 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
BRCC3-206ENST00000399042 TSR2Q969E8 191 aaKnown RBP11.56□□□□□ -0.56
BRCC3-206ENST00000399042 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
BRCC3-206ENST00000399042 KDM6AO15550 1401 aaPredicted RBP11.55□□□□□ -0.56
BRCC3-206ENST00000399042 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
BRCC3-206ENST00000399042 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
BRCC3-206ENST00000399042 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
BRCC3-206ENST00000399042 LRRC37A3O60309 1634 aa11.55□□□□□ -0.56
BRCC3-206ENST00000399042 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
BRCC3-206ENST00000399042 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 APBA3O96018 575 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 MBIPQ9NS73 344 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
BRCC3-206ENST00000399042 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
BRCC3-206ENST00000399042 CHL1O00533 1208 aa11.53□□□□□ -0.56
BRCC3-206ENST00000399042 SLFN5Q08AF3 891 aa11.53□□□□□ -0.56
BRCC3-206ENST00000399042 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
BRCC3-206ENST00000399042 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
BRCC3-206ENST00000399042 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
BRCC3-206ENST00000399042 ATG3Q9NT62 314 aa11.52□□□□□ -0.57
BRCC3-206ENST00000399042 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
BRCC3-206ENST00000399042 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
BRCC3-206ENST00000399042 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
BRCC3-206ENST00000399042 KCNQ3O43525 872 aa11.51□□□□□ -0.57
BRCC3-206ENST00000399042 EXOSC9Q06265 439 aaKnown RBP11.51□□□□□ -0.57
BRCC3-206ENST00000399042 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
BRCC3-206ENST00000399042 BCL9O00512 1426 aa11.51□□□□□ -0.57
BRCC3-206ENST00000399042 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
BRCC3-206ENST00000399042 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
BRCC3-206ENST00000399042 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
BRCC3-206ENST00000399042 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
BRCC3-206ENST00000399042 BAG6P46379 1132 aa11.5□□□□□ -0.57
BRCC3-206ENST00000399042 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
BRCC3-206ENST00000399042 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
BRCC3-206ENST00000399042 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
BRCC3-206ENST00000399042 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
BRCC3-206ENST00000399042 STARD3NLO95772 234 aa11.49□□□□□ -0.57
BRCC3-206ENST00000399042 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
BRCC3-206ENST00000399042 TWISTNBQ3B726 338 aaPredicted RBP11.49□□□□□ -0.57
BRCC3-206ENST00000399042 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
BRCC3-206ENST00000399042 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
BRCC3-206ENST00000399042 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
BRCC3-206ENST00000399042 CCNL1Q9UK58 526 aaPredicted RBP11.49□□□□□ -0.57
BRCC3-206ENST00000399042 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
BRCC3-206ENST00000399042 SIK1P57059 783 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 CCDC125Q86Z20 511 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 C8orf58Q8NAV2 365 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 ARXQ96QS3 562 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
BRCC3-206ENST00000399042 KRT24Q2M2I5 525 aa11.47□□□□□ -0.57
BRCC3-206ENST00000399042 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
BRCC3-206ENST00000399042 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms