RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MIS18AQ9NYP9 233 aa25.13■■□□□ 1.61
PDLIM2-205ENST00000397761 ITGB4P16144 1822 aa25.12■■□□□ 1.61
PDLIM2-205ENST00000397761 TNS2Q63HR2 1409 aa25.12■■□□□ 1.61
PDLIM2-205ENST00000397761 VPS72Q15906 364 aa25.12■■□□□ 1.61
PDLIM2-205ENST00000397761 TWISTNBQ3B726 338 aaPredicted RBP25.12■■□□□ 1.61
PDLIM2-205ENST00000397761 BARGINQ6ZT62 677 aa25.12■■□□□ 1.61
PDLIM2-205ENST00000397761 BRPF1P55201 1214 aaPredicted RBP25.11■■□□□ 1.61
PDLIM2-205ENST00000397761 POTEAQ6S8J7 498 aa25.11■■□□□ 1.61
PDLIM2-205ENST00000397761 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.11■■□□□ 1.61
PDLIM2-205ENST00000397761 SOS1Q07889 1333 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-205ENST00000397761 PAPPAQ13219 1627 aa25.1■■□□□ 1.61
PDLIM2-205ENST00000397761 SSH1Q8WYL5 1049 aa25.09■■□□□ 1.61
PDLIM2-205ENST00000397761 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
PDLIM2-205ENST00000397761 UBR2Q8IWV8 1755 aa25.09■■□□□ 1.61
PDLIM2-205ENST00000397761 IRX6P78412 446 aaPredicted RBP25.09■■□□□ 1.61
PDLIM2-205ENST00000397761 PLIN1O60240 522 aa25.08■■□□□ 1.6
PDLIM2-205ENST00000397761 THSD7AQ9UPZ6 1657 aa25.07■■□□□ 1.6
PDLIM2-205ENST00000397761 KRT24Q2M2I5 525 aa25.07■■□□□ 1.6
PDLIM2-205ENST00000397761 BTBD11A6QL63 1104 aa25.06■■□□□ 1.6
PDLIM2-205ENST00000397761 HEG1Q9ULI3 1381 aa25.06■■□□□ 1.6
PDLIM2-205ENST00000397761 ERVV-2B6SEH9 535 aa25.05■■□□□ 1.6
PDLIM2-205ENST00000397761 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
PDLIM2-205ENST00000397761 SMC4Q9NTJ3 1288 aa25.05■■□□□ 1.6
PDLIM2-205ENST00000397761 USP21Q9UK80 565 aa25.05■■□□□ 1.6
PDLIM2-205ENST00000397761 GLI3P10071 1580 aa25.04■■□□□ 1.6
PDLIM2-205ENST00000397761 ELL2O00472 640 aaPredicted RBP25.04■■□□□ 1.6
PDLIM2-205ENST00000397761 EIF4A1P60842 406 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-205ENST00000397761 BCL2L13Q9BXK5 485 aa25.04■■□□□ 1.6
PDLIM2-205ENST00000397761 EXOC5O00471 708 aa25.03■■□□□ 1.6
PDLIM2-205ENST00000397761 DDX54Q8TDD1 881 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-205ENST00000397761 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
PDLIM2-205ENST00000397761 HOXB7P09629 217 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 PDE3AQ14432 1141 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 NFATC2IPQ8NCF5 419 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 AFF2P51816 1311 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 KIF16BQ96L93 1317 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 ATRNO75882 1429 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 C5P01031 1676 aa25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 MRPL50Q8N5N7 158 aaKnown RBP25.02■■□□□ 1.6
PDLIM2-205ENST00000397761 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.59
PDLIM2-205ENST00000397761 C20orf194Q5TEA3 1177 aa25.01■■□□□ 1.59
PDLIM2-205ENST00000397761 KCNQ3O43525 872 aa25■■□□□ 1.59
PDLIM2-205ENST00000397761 CCDC9Q9Y3X0 531 aaKnown RBP25■■□□□ 1.59
PDLIM2-205ENST00000397761 LAMB4A4D0S4 1761 aa25■■□□□ 1.59
PDLIM2-205ENST00000397761 DDB1Q16531 1140 aa24.99■■□□□ 1.59
PDLIM2-205ENST00000397761 CABP4P57796 275 aa24.98■■□□□ 1.59
PDLIM2-205ENST00000397761 ZKSCAN2Q63HK3 967 aa24.98■■□□□ 1.59
PDLIM2-205ENST00000397761 ZNF790Q6PG37 636 aa24.98■■□□□ 1.59
PDLIM2-205ENST00000397761 ARHGAP45Q92619 1136 aa24.96■■□□□ 1.59
PDLIM2-205ENST00000397761 FRAT1Q92837 279 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-205ENST00000397761 IPO8O15397 1037 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-205ENST00000397761 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-205ENST00000397761 NOB1Q9ULX3 412 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-205ENST00000397761 KCPQ6ZWJ8 1503 aa24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 GIGYF1O75420 1035 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 MS4A1P11836 297 aa24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 ATF7IPQ6VMQ6 1270 aa24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 CHMP4AQ9BY43 222 aa24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 N4BP2Q86UW6 1770 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-205ENST00000397761 TRIM27P14373 513 aa24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 FAM98CQ17RN3 349 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 EXOC6Q8TAG9 804 aa24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 GJD4Q96KN9 370 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 TRPC5Q9UL62 973 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-205ENST00000397761 SLC39A6Q13433 755 aa24.92■■□□□ 1.58
PDLIM2-205ENST00000397761 CCDC30Q5VVM6 783 aa24.92■■□□□ 1.58
PDLIM2-205ENST00000397761 MARCH10Q8NA82 808 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-205ENST00000397761 PPP4R2Q9NY27 417 aa24.92■■□□□ 1.58
PDLIM2-205ENST00000397761 BCL9O00512 1426 aa24.92■■□□□ 1.58
PDLIM2-205ENST00000397761 ONECUT3O60422 494 aaPredicted RBP24.91■■□□□ 1.58
PDLIM2-205ENST00000397761 RLBP1P12271 317 aa24.9■■□□□ 1.58
PDLIM2-205ENST00000397761 TNNQ9UQP3 1299 aa24.9■■□□□ 1.58
PDLIM2-205ENST00000397761 TCERG1O14776 1098 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-205ENST00000397761 PANK1Q8TE04 598 aa24.89■■□□□ 1.58
PDLIM2-205ENST00000397761 TMOD3Q9NYL9 352 aa24.89■■□□□ 1.58
PDLIM2-205ENST00000397761 RGS12O14924 1447 aa24.89■■□□□ 1.57
PDLIM2-205ENST00000397761 HDGFL1Q5TGJ6 251 aa24.89■■□□□ 1.57
PDLIM2-205ENST00000397761 DZIP1LQ8IYY4 767 aaKnown RBP24.89■■□□□ 1.57
PDLIM2-205ENST00000397761 TTC5Q8N0Z6 440 aa24.89■■□□□ 1.57
PDLIM2-205ENST00000397761 ZNF496Q96IT1 587 aaPredicted RBP24.89■■□□□ 1.57
PDLIM2-205ENST00000397761 PTPRCP08575 1304 aa24.88■■□□□ 1.57
PDLIM2-205ENST00000397761 SLC4A2P04920 1241 aa24.88■■□□□ 1.57
PDLIM2-205ENST00000397761 RXRBP28702 533 aa24.88■■□□□ 1.57
PDLIM2-205ENST00000397761 FMNL2Q96PY5 1086 aa24.88■■□□□ 1.57
PDLIM2-205ENST00000397761 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
PDLIM2-205ENST00000397761 SBF2Q86WG5 1849 aa24.87■■□□□ 1.57
PDLIM2-205ENST00000397761 PIGBQ92521 554 aa24.87■■□□□ 1.57
PDLIM2-205ENST00000397761 ABCC4O15439 1325 aa24.86■■□□□ 1.57
PDLIM2-205ENST00000397761 API5Q9BZZ5 524 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-205ENST00000397761 QTRT2Q9H974 415 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-205ENST00000397761 BRWD3Q6RI45 1802 aa24.85■■□□□ 1.57
PDLIM2-205ENST00000397761 CICQ96RK0 1608 aaPredicted RBP24.85■■□□□ 1.57
PDLIM2-205ENST00000397761 CLUAP1Q96AJ1 413 aa24.84■■□□□ 1.57
PDLIM2-205ENST00000397761 SNRPA1P09661 255 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-205ENST00000397761 MVPQ14764 893 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-205ENST00000397761 FTSJ3Q8IY81 847 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-205ENST00000397761 COG6Q9Y2V7 657 aa24.83■■□□□ 1.57
PDLIM2-205ENST00000397761 NHSQ6T4R5 1651 aa24.83■■□□□ 1.57
PDLIM2-205ENST00000397761 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms