RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 MAP3K5Q99683 1374 aa22.71■■□□□ 1.23
AP1S3-203ENST00000396654 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 FCHSD2O94868 740 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 SIK1P57059 783 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 AKT1S1Q96B36 256 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 RBM42Q9BTD8 480 aaKnown RBP22.7■■□□□ 1.22
AP1S3-203ENST00000396654 C4BP0C0L5 1744 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 QSER1Q2KHR3 1735 aa22.7■■□□□ 1.22
AP1S3-203ENST00000396654 GNAT3A8MTJ3 354 aa22.68■■□□□ 1.22
AP1S3-203ENST00000396654 ZBTB7AO95365 584 aa22.68■■□□□ 1.22
AP1S3-203ENST00000396654 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
AP1S3-203ENST00000396654 MRC1P22897 1456 aa22.67■■□□□ 1.22
AP1S3-203ENST00000396654 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
AP1S3-203ENST00000396654 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
AP1S3-203ENST00000396654 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
AP1S3-203ENST00000396654 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
AP1S3-203ENST00000396654 ITPK1Q13572 414 aa22.66■■□□□ 1.22
AP1S3-203ENST00000396654 NEFMP07197 916 aa22.65■■□□□ 1.22
AP1S3-203ENST00000396654 SLC39A6Q13433 755 aa22.65■■□□□ 1.22
AP1S3-203ENST00000396654 LINC00116Q8NCU8 138 aa22.65■■□□□ 1.22
AP1S3-203ENST00000396654 IL17REQ8NFR9 667 aa22.65■■□□□ 1.22
AP1S3-203ENST00000396654 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
AP1S3-203ENST00000396654 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.22
AP1S3-203ENST00000396654 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
AP1S3-203ENST00000396654 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
AP1S3-203ENST00000396654 ATF5Q9Y2D1 282 aaPredicted RBP22.64■■□□□ 1.21
AP1S3-203ENST00000396654 COL5A3P25940 1745 aaPredicted RBP22.63■■□□□ 1.21
AP1S3-203ENST00000396654 TJP1Q07157 1748 aa22.63■■□□□ 1.21
AP1S3-203ENST00000396654 MSH5O43196 834 aa22.63■■□□□ 1.21
AP1S3-203ENST00000396654 TEFQ10587 303 aa22.62■■□□□ 1.21
AP1S3-203ENST00000396654 DCTN1Q14203 1278 aa22.62■■□□□ 1.21
AP1S3-203ENST00000396654 AK7Q96M32 723 aa22.62■■□□□ 1.21
AP1S3-203ENST00000396654 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
AP1S3-203ENST00000396654 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
AP1S3-203ENST00000396654 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
AP1S3-203ENST00000396654 WDR43Q15061 677 aaKnown RBP eCLIP22.61■■□□□ 1.21
AP1S3-203ENST00000396654 MCM10Q7L590 875 aa22.61■■□□□ 1.21
AP1S3-203ENST00000396654 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
AP1S3-203ENST00000396654 ZNF831Q5JPB2 1677 aa22.61■■□□□ 1.21
AP1S3-203ENST00000396654 PHF14O94880 888 aa22.6■■□□□ 1.21
AP1S3-203ENST00000396654 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
AP1S3-203ENST00000396654 UBR2Q8IWV8 1755 aa22.6■■□□□ 1.21
AP1S3-203ENST00000396654 AMIGO3Q86WK7 504 aa22.59■■□□□ 1.21
AP1S3-203ENST00000396654 MYH14Q7Z406 1995 aaKnown RBP22.59■■□□□ 1.21
AP1S3-203ENST00000396654 ANP32CO43423 234 aa22.58■■□□□ 1.21
AP1S3-203ENST00000396654 COL23A1Q86Y22 540 aaPredicted RBP22.58■■□□□ 1.21
AP1S3-203ENST00000396654 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.21
AP1S3-203ENST00000396654 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
AP1S3-203ENST00000396654 GNPATO15228 680 aa22.57■■□□□ 1.2
AP1S3-203ENST00000396654 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
AP1S3-203ENST00000396654 CEMIPQ8WUJ3 1361 aa22.56■■□□□ 1.2
AP1S3-203ENST00000396654 NFE2L2Q16236 605 aa22.56■■□□□ 1.2
AP1S3-203ENST00000396654 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
AP1S3-203ENST00000396654 PPP1R1BQ9UD71 204 aaPredicted RBP22.56■■□□□ 1.2
AP1S3-203ENST00000396654 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
AP1S3-203ENST00000396654 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
AP1S3-203ENST00000396654 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
AP1S3-203ENST00000396654 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
AP1S3-203ENST00000396654 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
AP1S3-203ENST00000396654 CICQ96RK0 1608 aaPredicted RBP22.53■■□□□ 1.2
AP1S3-203ENST00000396654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.53■■□□□ 1.2
AP1S3-203ENST00000396654 KCNQ3O43525 872 aa22.53■■□□□ 1.2
AP1S3-203ENST00000396654 HMGB2P26583 209 aaKnown RBP22.53■■□□□ 1.2
AP1S3-203ENST00000396654 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
AP1S3-203ENST00000396654 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
AP1S3-203ENST00000396654 PTGER2P43116 358 aa22.52■■□□□ 1.2
AP1S3-203ENST00000396654 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
AP1S3-203ENST00000396654 HTATSF1O43719 755 aaKnown RBP22.5■■□□□ 1.19
AP1S3-203ENST00000396654 CRKLP46109 303 aaKnown RBP22.5■■□□□ 1.19
AP1S3-203ENST00000396654 ZNF790Q6PG37 636 aa22.5■■□□□ 1.19
AP1S3-203ENST00000396654 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
AP1S3-203ENST00000396654 C4AP0C0L4 1744 aa22.5■■□□□ 1.19
AP1S3-203ENST00000396654 COL24A1Q17RW2 1714 aa22.5■■□□□ 1.19
AP1S3-203ENST00000396654 CNTNAP4Q9C0A0 1308 aa22.5■■□□□ 1.19
AP1S3-203ENST00000396654 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
AP1S3-203ENST00000396654 RIPK4P57078 832 aa22.49■■□□□ 1.19
AP1S3-203ENST00000396654 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
AP1S3-203ENST00000396654 SLC16A10Q8TF71 515 aa22.49■■□□□ 1.19
AP1S3-203ENST00000396654 MIS18AQ9NYP9 233 aa22.49■■□□□ 1.19
AP1S3-203ENST00000396654 RTCBQ9Y3I0 505 aaKnown RBP22.49■■□□□ 1.19
AP1S3-203ENST00000396654 SSFA2P28290 1259 aa22.48■■□□□ 1.19
AP1S3-203ENST00000396654 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
AP1S3-203ENST00000396654 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
AP1S3-203ENST00000396654 KDM3BQ7LBC6 1761 aa22.47■■□□□ 1.19
AP1S3-203ENST00000396654 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
AP1S3-203ENST00000396654 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
AP1S3-203ENST00000396654 KLHL34Q8N239 644 aa22.46■■□□□ 1.19
AP1S3-203ENST00000396654 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
AP1S3-203ENST00000396654 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
AP1S3-203ENST00000396654 RPS6KA4O75676 772 aa22.45■■□□□ 1.18
AP1S3-203ENST00000396654 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
AP1S3-203ENST00000396654 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
AP1S3-203ENST00000396654 INTS5Q6P9B9 1019 aaKnown RBP22.45■■□□□ 1.18
AP1S3-203ENST00000396654 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
AP1S3-203ENST00000396654 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
AP1S3-203ENST00000396654 POLD1P28340 1107 aa22.44■■□□□ 1.18
AP1S3-203ENST00000396654 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
AP1S3-203ENST00000396654 ARXQ96QS3 562 aa22.44■■□□□ 1.18
AP1S3-203ENST00000396654 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
AP1S3-203ENST00000396654 ARHGEF1Q92888 912 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms