RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 SLC52A2Q9HAB3 445 aa28.49■■■□□ 2.15
PIKFYVE-203ENST00000392202 DDX54Q8TDD1 881 aaKnown RBP28.48■■■□□ 2.15
PIKFYVE-203ENST00000392202 EXOC5O00471 708 aa28.48■■■□□ 2.15
PIKFYVE-203ENST00000392202 FKBP8Q14318 412 aa28.48■■■□□ 2.15
PIKFYVE-203ENST00000392202 BTBD11A6QL63 1104 aa28.47■■■□□ 2.15
PIKFYVE-203ENST00000392202 ALDH1L2Q3SY69 923 aa28.47■■■□□ 2.15
PIKFYVE-203ENST00000392202 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.47■■■□□ 2.15
PIKFYVE-203ENST00000392202 ATRNO75882 1429 aa28.46■■■□□ 2.15
PIKFYVE-203ENST00000392202 GLI3P10071 1580 aa28.46■■■□□ 2.15
PIKFYVE-203ENST00000392202 KRT24Q2M2I5 525 aa28.45■■■□□ 2.15
PIKFYVE-203ENST00000392202 SSH1Q8WYL5 1049 aa28.45■■■□□ 2.14
PIKFYVE-203ENST00000392202 SOS1Q07889 1333 aaPredicted RBP28.45■■■□□ 2.14
PIKFYVE-203ENST00000392202 THSD7AQ9UPZ6 1657 aa28.44■■■□□ 2.14
PIKFYVE-203ENST00000392202 ERVV-2B6SEH9 535 aa28.44■■■□□ 2.14
PIKFYVE-203ENST00000392202 ELL2O00472 640 aaPredicted RBP28.43■■■□□ 2.14
PIKFYVE-203ENST00000392202 IRX6P78412 446 aaPredicted RBP28.43■■■□□ 2.14
PIKFYVE-203ENST00000392202 DDB1Q16531 1140 aa28.43■■■□□ 2.14
PIKFYVE-203ENST00000392202 PAPPAQ13219 1627 aa28.43■■■□□ 2.14
PIKFYVE-203ENST00000392202 PLIN1O60240 522 aa28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 NFATC2IPQ8NCF5 419 aa28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 SMC4Q9NTJ3 1288 aa28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 CABP4P57796 275 aa28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 EIF4A1P60842 406 aaKnown RBP28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 BCL2L13Q9BXK5 485 aa28.42■■■□□ 2.14
PIKFYVE-203ENST00000392202 BRPF1P55201 1214 aaPredicted RBP28.4■■■□□ 2.14
PIKFYVE-203ENST00000392202 FAM98CQ17RN3 349 aaKnown RBP28.4■■■□□ 2.14
PIKFYVE-203ENST00000392202 ITGB4P16144 1822 aa28.4■■■□□ 2.14
PIKFYVE-203ENST00000392202 KCNQ3O43525 872 aa28.4■■■□□ 2.14
PIKFYVE-203ENST00000392202 TRPC5Q9UL62 973 aaPredicted RBP28.4■■■□□ 2.14
PIKFYVE-203ENST00000392202 ERICH6BQ5W0A0 696 aa28.39■■■□□ 2.14
PIKFYVE-203ENST00000392202 GJD4Q96KN9 370 aaPredicted RBP28.38■■■□□ 2.13
PIKFYVE-203ENST00000392202 HEG1Q9ULI3 1381 aa28.37■■■□□ 2.13
PIKFYVE-203ENST00000392202 DOT1LQ8TEK3 1739 aa28.37■■■□□ 2.13
PIKFYVE-203ENST00000392202 UBR2Q8IWV8 1755 aa28.37■■■□□ 2.13
PIKFYVE-203ENST00000392202 HOXB7P09629 217 aa28.36■■■□□ 2.13
PIKFYVE-203ENST00000392202 ZNF790Q6PG37 636 aa28.36■■■□□ 2.13
PIKFYVE-203ENST00000392202 MRPL50Q8N5N7 158 aaKnown RBP28.36■■■□□ 2.13
PIKFYVE-203ENST00000392202 KIF16BQ96L93 1317 aa28.36■■■□□ 2.13
PIKFYVE-203ENST00000392202 QTRT2Q9H974 415 aaKnown RBP28.35■■■□□ 2.13
PIKFYVE-203ENST00000392202 CANXP27824 592 aaKnown RBP28.33■■■□□ 2.13
PIKFYVE-203ENST00000392202 FRAT1Q92837 279 aaPredicted RBP28.33■■■□□ 2.13
PIKFYVE-203ENST00000392202 CACNA1FO60840 1977 aa28.33■■■□□ 2.13
PIKFYVE-203ENST00000392202 SLC39A6Q13433 755 aa28.33■■■□□ 2.13
PIKFYVE-203ENST00000392202 MARCH10Q8NA82 808 aaPredicted RBP28.33■■■□□ 2.13
PIKFYVE-203ENST00000392202 C20orf194Q5TEA3 1177 aa28.32■■■□□ 2.12
PIKFYVE-203ENST00000392202 C5P01031 1676 aa28.32■■■□□ 2.12
PIKFYVE-203ENST00000392202 PDE3AQ14432 1141 aa28.31■■■□□ 2.12
PIKFYVE-203ENST00000392202 ZKSCAN2Q63HK3 967 aa28.31■■■□□ 2.12
PIKFYVE-203ENST00000392202 TMOD3Q9NYL9 352 aa28.3■■■□□ 2.12
PIKFYVE-203ENST00000392202 ONECUT3O60422 494 aaPredicted RBP28.3■■■□□ 2.12
PIKFYVE-203ENST00000392202 TTC5Q8N0Z6 440 aa28.3■■■□□ 2.12
PIKFYVE-203ENST00000392202 NOB1Q9ULX3 412 aaKnown RBP28.3■■■□□ 2.12
PIKFYVE-203ENST00000392202 KCPQ6ZWJ8 1503 aa28.29■■■□□ 2.12
PIKFYVE-203ENST00000392202 TCERG1O14776 1098 aaKnown RBP28.29■■■□□ 2.12
PIKFYVE-203ENST00000392202 GIGYF1O75420 1035 aaPredicted RBP28.29■■■□□ 2.12
PIKFYVE-203ENST00000392202 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
PIKFYVE-203ENST00000392202 A0A0G2JS52 829 aa28.28■■■□□ 2.12
PIKFYVE-203ENST00000392202 MYT1Q01538 1121 aa28.28■■■□□ 2.12
PIKFYVE-203ENST00000392202 CHMP4AQ9BY43 222 aa28.28■■■□□ 2.12
PIKFYVE-203ENST00000392202 LAMB4A4D0S4 1761 aa28.28■■■□□ 2.12
PIKFYVE-203ENST00000392202 IPO8O15397 1037 aaKnown RBP28.28■■■□□ 2.12
PIKFYVE-203ENST00000392202 BCL9O00512 1426 aa28.27■■■□□ 2.12
PIKFYVE-203ENST00000392202 ZNF772Q68DY9 489 aaPredicted RBP28.27■■■□□ 2.12
PIKFYVE-203ENST00000392202 ATF7IPQ6VMQ6 1270 aa28.26■■■□□ 2.12
PIKFYVE-203ENST00000392202 ARHGAP45Q92619 1136 aa28.26■■■□□ 2.12
PIKFYVE-203ENST00000392202 MS4A1P11836 297 aa28.26■■■□□ 2.11
PIKFYVE-203ENST00000392202 HDGFL1Q5TGJ6 251 aa28.26■■■□□ 2.11
PIKFYVE-203ENST00000392202 ZNF496Q96IT1 587 aaPredicted RBP28.26■■■□□ 2.11
PIKFYVE-203ENST00000392202 FMNL2Q96PY5 1086 aa28.26■■■□□ 2.11
PIKFYVE-203ENST00000392202 CRBNQ96SW2 442 aa28.26■■■□□ 2.11
PIKFYVE-203ENST00000392202 PIGBQ92521 554 aa28.25■■■□□ 2.11
PIKFYVE-203ENST00000392202 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
PIKFYVE-203ENST00000392202 TRIM27P14373 513 aa28.24■■■□□ 2.11
PIKFYVE-203ENST00000392202 TNNQ9UQP3 1299 aa28.24■■■□□ 2.11
PIKFYVE-203ENST00000392202 EXOC6Q8TAG9 804 aa28.23■■■□□ 2.11
PIKFYVE-203ENST00000392202 SLC4A2P04920 1241 aa28.22■■■□□ 2.11
PIKFYVE-203ENST00000392202 DZIP1LQ8IYY4 767 aaKnown RBP28.21■■■□□ 2.11
PIKFYVE-203ENST00000392202 PANK1Q8TE04 598 aa28.21■■■□□ 2.11
PIKFYVE-203ENST00000392202 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
PIKFYVE-203ENST00000392202 SEPT12Q8IYM1 358 aa28.21■■■□□ 2.11
PIKFYVE-203ENST00000392202 RLBP1P12271 317 aa28.2■■■□□ 2.11
PIKFYVE-203ENST00000392202 PRIM1P49642 420 aaKnown RBP28.2■■■□□ 2.11
PIKFYVE-203ENST00000392202 PTPRCP08575 1304 aa28.2■■■□□ 2.1
PIKFYVE-203ENST00000392202 PRAMEF22A3QJZ6 481 aa28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 EIF2S2P20042 333 aaKnown RBP28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 NECTIN2Q92692 538 aa28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 RGS17Q9UGC6 210 aaPredicted RBP28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 ATG3Q9NT62 314 aa28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 KAT6BQ8WYB5 2073 aa28.19■■■□□ 2.1
PIKFYVE-203ENST00000392202 FTSJ3Q8IY81 847 aaKnown RBP28.18■■■□□ 2.1
PIKFYVE-203ENST00000392202 PPP4R2Q9NY27 417 aa28.18■■■□□ 2.1
PIKFYVE-203ENST00000392202 RGS12O14924 1447 aa28.18■■■□□ 2.1
PIKFYVE-203ENST00000392202 BRWD3Q6RI45 1802 aa28.18■■■□□ 2.1
PIKFYVE-203ENST00000392202 CLUAP1Q96AJ1 413 aa28.18■■■□□ 2.1
PIKFYVE-203ENST00000392202 ASAP1Q9ULH1 1129 aa28.17■■■□□ 2.1
PIKFYVE-203ENST00000392202 NHSQ6T4R5 1651 aa28.17■■■□□ 2.1
PIKFYVE-203ENST00000392202 RBM6P78332 1123 aaKnown RBP28.16■■■□□ 2.1
PIKFYVE-203ENST00000392202 SYTL4Q96C24 671 aaPredicted RBP28.16■■■□□ 2.1
PIKFYVE-203ENST00000392202 G2E3Q7L622 706 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms