RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.36□□□□□ -0.59
RNU1-28P-201ENST00000383861 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
RNU1-28P-201ENST00000383861 FKBP8Q14318 412 aa11.36□□□□□ -0.59
RNU1-28P-201ENST00000383861 DDB1Q16531 1140 aa11.36□□□□□ -0.59
RNU1-28P-201ENST00000383861 TRPC5Q9UL62 973 aaPredicted RBP11.36□□□□□ -0.59
RNU1-28P-201ENST00000383861 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 SMC4Q9NTJ3 1288 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 MRC1P22897 1456 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 AFF2P51816 1311 aa11.35□□□□□ -0.59
RNU1-28P-201ENST00000383861 BCAR3O75815 825 aa11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 EIF4A1P60842 406 aaKnown RBP11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 NFATC2IPQ8NCF5 419 aa11.34□□□□□ -0.59
RNU1-28P-201ENST00000383861 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 TSPYL6Q8N831 410 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 ARHGAP45Q92619 1136 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 GJD4Q96KN9 370 aaPredicted RBP11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 SCN11AQ9UI33 1791 aa11.33□□□□□ -0.6
RNU1-28P-201ENST00000383861 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 AAMPQ13685 434 aa11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 ATRNO75882 1429 aa11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
RNU1-28P-201ENST00000383861 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
RNU1-28P-201ENST00000383861 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
RNU1-28P-201ENST00000383861 FRAT1Q92837 279 aaPredicted RBP11.31□□□□□ -0.6
RNU1-28P-201ENST00000383861 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
RNU1-28P-201ENST00000383861 HEG1Q9ULI3 1381 aa11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 API5Q9BZZ5 524 aaKnown RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 CHMP4BQ9H444 224 aaKnown RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 KDM3BQ7LBC6 1761 aa11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 PTPRCP08575 1304 aa11.3□□□□□ -0.6
RNU1-28P-201ENST00000383861 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 A0A0G2JS52 829 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 PLIN1O60240 522 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 SNRPA1P09661 255 aaKnown RBP11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 MYT1Q01538 1121 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 KRT24Q2M2I5 525 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
RNU1-28P-201ENST00000383861 KCNQ3O43525 872 aa11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 IRX6P78412 446 aaPredicted RBP11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
RNU1-28P-201ENST00000383861 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
RNU1-28P-201ENST00000383861 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
RNU1-28P-201ENST00000383861 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
RNU1-28P-201ENST00000383861 VIRMAQ69YN4 1812 aaKnown RBP11.27□□□□□ -0.61
RNU1-28P-201ENST00000383861 TRIM27P14373 513 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 PIGBQ92521 554 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 THSD7AQ9UPZ6 1657 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 BCL9O00512 1426 aa11.26□□□□□ -0.61
RNU1-28P-201ENST00000383861 GLI3P10071 1580 aa11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 EIF2S2P20042 333 aaKnown RBP11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
RNU1-28P-201ENST00000383861 MVPQ14764 893 aaKnown RBP11.24□□□□□ -0.61
RNU1-28P-201ENST00000383861 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
RNU1-28P-201ENST00000383861 EXOC6Q8TAG9 804 aa11.24□□□□□ -0.61
RNU1-28P-201ENST00000383861 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNU1-28P-201ENST00000383861 DDX19BQ9UMR2 479 aa11.24□□□□□ -0.61
RNU1-28P-201ENST00000383861 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
RNU1-28P-201ENST00000383861 FLIIQ13045 1269 aa11.23□□□□□ -0.61
RNU1-28P-201ENST00000383861 PANK1Q8TE04 598 aa11.23□□□□□ -0.61
RNU1-28P-201ENST00000383861 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
RNU1-28P-201ENST00000383861 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
RNU1-28P-201ENST00000383861 ABCC4O15439 1325 aa11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 STARD3NLO95772 234 aa11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
RNU1-28P-201ENST00000383861 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms