RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 UNC5CLQ8IV45 518 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 HECW2Q9P2P5 1572 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 REC8O95072 547 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 PTMAP06454 111 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 ATP2B3Q16720 1220 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 HMMRO75330 724 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 NUCB2P80303 420 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-202ENST00000380281 CHL1O00533 1208 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 CPA1P15085 419 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 ZDHHC9Q9Y397 364 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 MAP2P11137 1827 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 RTL1A6NKG5 1358 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
PRPF40B-202ENST00000380281 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 ARHGEF40Q8TER5 1519 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 NLRP6P59044 892 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 ZNF710Q8N1W2 664 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 TMEM63CQ9P1W3 806 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 PDLIM2Q96JY6 352 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
PRPF40B-202ENST00000380281 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 GNAI2P04899 355 aa15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 PTMSP20962 102 aa15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 SURF6O75683 361 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 BRPF1P55201 1214 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 IL25Q9H293 177 aa15.1■□□□□ 0.01
PRPF40B-202ENST00000380281 CPS1P31327 1500 aa15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 OS9Q13438 667 aaPredicted RBP15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 ZNF445P59923 1031 aa15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 ZNF830Q96NB3 372 aaPredicted RBP15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
PRPF40B-202ENST00000380281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0.01
PRPF40B-202ENST00000380281 MX1P20591 662 aa15.08■□□□□ 0.01
PRPF40B-202ENST00000380281 FLIIQ13045 1269 aa15.08■□□□□ 0.01
PRPF40B-202ENST00000380281 EYA1Q99502 592 aa15.08■□□□□ 0
PRPF40B-202ENST00000380281 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
PRPF40B-202ENST00000380281 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
PRPF40B-202ENST00000380281 SPG7Q9UQ90 795 aa15.08■□□□□ 0
PRPF40B-202ENST00000380281 GTPBP4Q9BZE4 634 aaKnown RBP15.07■□□□□ 0
PRPF40B-202ENST00000380281 KIF20AO95235 890 aa15.07■□□□□ 0
PRPF40B-202ENST00000380281 C17orf53Q8N3J3 647 aaPredicted RBP15.07■□□□□ 0
PRPF40B-202ENST00000380281 MED14O60244 1454 aa15.06■□□□□ 0
PRPF40B-202ENST00000380281 MYRIPQ8NFW9 859 aa15.06■□□□□ 0
PRPF40B-202ENST00000380281 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
PRPF40B-202ENST00000380281 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
PRPF40B-202ENST00000380281 CWC27Q6UX04 472 aaKnown RBP15.06■□□□□ 0
PRPF40B-202ENST00000380281 CCDC39Q9UFE4 941 aa15.06■□□□□ 0
PRPF40B-202ENST00000380281 NEURL4Q96JN8 1562 aa15.05■□□□□ 0
PRPF40B-202ENST00000380281 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
PRPF40B-202ENST00000380281 IBTKQ9P2D0 1353 aaPredicted RBP15.05■□□□□ -0
PRPF40B-202ENST00000380281 ATP10DQ9P241 1426 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
PRPF40B-202ENST00000380281 UBTFL1P0CB47 393 aaPredicted RBP15.04■□□□□ -0
PRPF40B-202ENST00000380281 LTKP29376 864 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 USP32Q8NFA0 1604 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 DIP2CQ9Y2E4 1556 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 MCCP23508 829 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 HDGFL1Q5TGJ6 251 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.04■□□□□ -0
PRPF40B-202ENST00000380281 PIK3R4Q99570 1358 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 FIBPO43427 364 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
PRPF40B-202ENST00000380281 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
PRPF40B-202ENST00000380281 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
PRPF40B-202ENST00000380281 SRGAP3O43295 1099 aa15.03■□□□□ -0
PRPF40B-202ENST00000380281 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
PRPF40B-202ENST00000380281 CHMLP26374 656 aa15.03■□□□□ -0
PRPF40B-202ENST00000380281 TCEANC2Q96MN5 208 aa15.03■□□□□ -0
PRPF40B-202ENST00000380281 CCT4P50991 539 aaKnown RBP15.02■□□□□ -0
PRPF40B-202ENST00000380281 PPP1R42Q7Z4L9 355 aa15.02■□□□□ -0
PRPF40B-202ENST00000380281 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
PRPF40B-202ENST00000380281 ABTB2Q8N961 1025 aa15.02□□□□□ -0.01
PRPF40B-202ENST00000380281 KCNQ3O43525 872 aa15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 MCM5P33992 734 aa15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 PTPRCP08575 1304 aa15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 CWC22Q9HCG8 908 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 AIMP1Q12904 312 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
PRPF40B-202ENST00000380281 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms