RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 CEP85Q6P2H3 762 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 PLCD3Q8N3E9 789 aa18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
CSNK1A1-202ENST00000377843 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 KRT24Q2M2I5 525 aa18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 UPF3BQ9BZI7 483 aaKnown RBP18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 PTGS1P23219 599 aa18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 MCM2P49736 904 aa18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
CSNK1A1-202ENST00000377843 LRRC7Q96NW7 1537 aa18.86■□□□□ 0.61
CSNK1A1-202ENST00000377843 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
CSNK1A1-202ENST00000377843 TWISTNBQ3B726 338 aaPredicted RBP18.86■□□□□ 0.61
CSNK1A1-202ENST00000377843 FYB1O15117 783 aa18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 TERF2Q15554 542 aa18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 API5Q9BZZ5 524 aaKnown RBP18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 MORC2Q9Y6X9 1032 aaPredicted RBP18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 C16orf45Q96MC5 204 aaPredicted RBP18.85■□□□□ 0.61
CSNK1A1-202ENST00000377843 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 WDR33Q9C0J8 1336 aaKnown RBP18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 LRMPQ12912 555 aa18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 ARHGEF40Q8TER5 1519 aa18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 FBLN1P23142 703 aa18.84■□□□□ 0.61
CSNK1A1-202ENST00000377843 EVC2Q86UK5 1308 aa18.83■□□□□ 0.61
CSNK1A1-202ENST00000377843 FCHSD2O94868 740 aa18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 ZNF853P0CG23 659 aa18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 ESYT1Q9BSJ8 1104 aa18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 FAM135BQ49AJ0 1406 aa18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 SYCP1Q15431 976 aa18.83■□□□□ 0.6
CSNK1A1-202ENST00000377843 PNPLA6Q8IY17 1366 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 TCHHQ07283 1943 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 PDIA4P13667 645 aaKnown RBP18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 UBE2HP62256 183 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 RGS12O14924 1447 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 HMOX1P09601 288 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 PDE1AP54750 535 aa18.82■□□□□ 0.6
CSNK1A1-202ENST00000377843 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
CSNK1A1-202ENST00000377843 FIBPO43427 364 aa18.81■□□□□ 0.6
CSNK1A1-202ENST00000377843 DTNBO60941 627 aa18.81■□□□□ 0.6
CSNK1A1-202ENST00000377843 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
CSNK1A1-202ENST00000377843 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
CSNK1A1-202ENST00000377843 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 KIF1BO60333 1816 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 TPM3P06753 285 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 CDK11BP21127 795 aaKnown RBP18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 NRBP1Q9UHY1 535 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 GNAI1P63096 354 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 MEIS3Q99687 375 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 ST7Q9NRC1 585 aa18.8■□□□□ 0.6
CSNK1A1-202ENST00000377843 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
CSNK1A1-202ENST00000377843 TNNT1P13805 278 aa18.79■□□□□ 0.6
CSNK1A1-202ENST00000377843 CAPN2P17655 700 aa18.79■□□□□ 0.6
CSNK1A1-202ENST00000377843 CCDC186Q7Z3E2 898 aa18.79■□□□□ 0.6
CSNK1A1-202ENST00000377843 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
CSNK1A1-202ENST00000377843 ZSCAN22P10073 491 aaPredicted RBP18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 KMT5BQ4FZB7 885 aa18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 IL25Q9H293 177 aa18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 MSH6P52701 1360 aa18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 ERICH4A6NGS2 130 aa18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 LARP6Q9BRS8 491 aaKnown RBP18.78■□□□□ 0.6
CSNK1A1-202ENST00000377843 STAG3Q9UJ98 1225 aa18.77■□□□□ 0.6
CSNK1A1-202ENST00000377843 GOLGA6L6A8MZA4 724 aa18.77■□□□□ 0.59
CSNK1A1-202ENST00000377843 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 ANAPC15P60006 121 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 KRT222Q8N1A0 295 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 TIGD1Q96MW7 591 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 FAM53CQ9NYF3 392 aa18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 V9GYY5 206 aaPredicted RBP18.76■□□□□ 0.59
CSNK1A1-202ENST00000377843 SYT1P21579 422 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 CHMLP26374 656 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 LUZP1Q86V48 1076 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 CCDC112Q8NEF3 446 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 CCDC66A2RUB6 948 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 MCCP23508 829 aa18.75■□□□□ 0.59
CSNK1A1-202ENST00000377843 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 STK26Q9P289 416 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 TULP2O00295 520 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 STX6O43752 255 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 F13A1P00488 732 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 DNM1Q05193 864 aaKnown RBP18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
CSNK1A1-202ENST00000377843 SALL3Q9BXA9 1300 aa18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 CDC42BPGQ6DT37 1551 aa18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
CSNK1A1-202ENST00000377843 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
CSNK1A1-202ENST00000377843 SLC20A2Q08357 652 aa18.72■□□□□ 0.59
CSNK1A1-202ENST00000377843 ZNF215Q9UL58 517 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms