RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 MRS2Q9HD23 443 aa30■■■□□ 2.39
YIF1A-202ENST00000376899 ATG3Q9NT62 314 aa30■■■□□ 2.39
YIF1A-202ENST00000376899 ASAP1Q9ULH1 1129 aa30■■■□□ 2.39
YIF1A-202ENST00000376899 ZNF831Q5JPB2 1677 aa30■■■□□ 2.39
YIF1A-202ENST00000376899 TAF1LQ8IZX4 1826 aa29.99■■■□□ 2.39
YIF1A-202ENST00000376899 LRRC4BQ9NT99 713 aa29.99■■■□□ 2.39
YIF1A-202ENST00000376899 RUNDC1Q96C34 613 aa29.98■■■□□ 2.39
YIF1A-202ENST00000376899 PNISRQ8TF01 805 aaKnown RBP29.97■■■□□ 2.39
YIF1A-202ENST00000376899 C5P01031 1676 aa29.97■■■□□ 2.39
YIF1A-202ENST00000376899 CCDC146Q8IYE0 955 aa29.96■■■□□ 2.39
YIF1A-202ENST00000376899 CCNL1Q9UK58 526 aaPredicted RBP29.96■■■□□ 2.39
YIF1A-202ENST00000376899 RTF1Q92541 710 aaKnown RBP29.95■■■□□ 2.39
YIF1A-202ENST00000376899 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
YIF1A-202ENST00000376899 NBPF14Q5TI25 921 aa29.94■■■□□ 2.38
YIF1A-202ENST00000376899 ANO8Q9HCE9 1232 aaPredicted RBP29.94■■■□□ 2.38
YIF1A-202ENST00000376899 UBR2Q8IWV8 1755 aa29.94■■■□□ 2.38
YIF1A-202ENST00000376899 LOC102724428A0A0B4J2F2 783 aa29.92■■■□□ 2.38
YIF1A-202ENST00000376899 TMPOP42166 694 aaKnown RBP29.92■■■□□ 2.38
YIF1A-202ENST00000376899 SIK1P57059 783 aa29.92■■■□□ 2.38
YIF1A-202ENST00000376899 TEFQ10587 303 aa29.92■■■□□ 2.38
YIF1A-202ENST00000376899 MCM10Q7L590 875 aa29.92■■■□□ 2.38
YIF1A-202ENST00000376899 QSER1Q2KHR3 1735 aa29.91■■■□□ 2.38
YIF1A-202ENST00000376899 KCNQ4P56696 695 aa29.9■■■□□ 2.38
YIF1A-202ENST00000376899 KCPQ6ZWJ8 1503 aa29.9■■■□□ 2.38
YIF1A-202ENST00000376899 DCTN1Q14203 1278 aa29.89■■■□□ 2.38
YIF1A-202ENST00000376899 DIEXFQ68CQ4 756 aaKnown RBP29.89■■■□□ 2.38
YIF1A-202ENST00000376899 COL5A3P25940 1745 aaPredicted RBP29.88■■■□□ 2.37
YIF1A-202ENST00000376899 TUBGCP6Q96RT7 1819 aa29.88■■■□□ 2.37
YIF1A-202ENST00000376899 HMGB2P26583 209 aaKnown RBP29.88■■■□□ 2.37
YIF1A-202ENST00000376899 C4BP0C0L5 1744 aa29.88■■■□□ 2.37
YIF1A-202ENST00000376899 RIPK4P57078 832 aa29.87■■■□□ 2.37
YIF1A-202ENST00000376899 R3HDM1Q15032 1099 aaKnown RBP29.87■■■□□ 2.37
YIF1A-202ENST00000376899 STK32BQ9NY57 414 aa29.87■■■□□ 2.37
YIF1A-202ENST00000376899 TJP1Q07157 1748 aa29.87■■■□□ 2.37
YIF1A-202ENST00000376899 SLC15A2Q16348 729 aa29.86■■■□□ 2.37
YIF1A-202ENST00000376899 AKT1S1Q96B36 256 aa29.86■■■□□ 2.37
YIF1A-202ENST00000376899 SLC4A9Q96Q91 983 aa29.86■■■□□ 2.37
YIF1A-202ENST00000376899 LMOD3Q0VAK6 560 aa29.85■■■□□ 2.37
YIF1A-202ENST00000376899 SLC39A6Q13433 755 aa29.85■■■□□ 2.37
YIF1A-202ENST00000376899 ZNF827Q17R98 1081 aa29.85■■■□□ 2.37
YIF1A-202ENST00000376899 CASZ1Q86V15 1759 aa29.85■■■□□ 2.37
YIF1A-202ENST00000376899 PSDA5PKW4 1024 aaPredicted RBP29.84■■■□□ 2.37
YIF1A-202ENST00000376899 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
YIF1A-202ENST00000376899 ATP6V1AP38606 617 aa29.83■■■□□ 2.37
YIF1A-202ENST00000376899 ITPK1Q13572 414 aa29.83■■■□□ 2.37
YIF1A-202ENST00000376899 RRP7AQ9Y3A4 280 aaKnown RBP29.83■■■□□ 2.37
YIF1A-202ENST00000376899 KDM3BQ7LBC6 1761 aa29.82■■■□□ 2.36
YIF1A-202ENST00000376899 CCER2I3L3R5 266 aa29.82■■■□□ 2.36
YIF1A-202ENST00000376899 PTCD1O75127 700 aaKnown RBP29.81■■■□□ 2.36
YIF1A-202ENST00000376899 ZNF790Q6PG37 636 aa29.81■■■□□ 2.36
YIF1A-202ENST00000376899 BTBD11A6QL63 1104 aa29.8■■■□□ 2.36
YIF1A-202ENST00000376899 APAF1O14727 1248 aa29.8■■■□□ 2.36
YIF1A-202ENST00000376899 TAF7Q15545 349 aaPredicted RBP29.8■■■□□ 2.36
YIF1A-202ENST00000376899 LINC00116Q8NCU8 138 aa29.8■■■□□ 2.36
YIF1A-202ENST00000376899 THUMPD2Q9BTF0 503 aaKnown RBP29.8■■■□□ 2.36
YIF1A-202ENST00000376899 TRIM35Q9UPQ4 493 aa29.8■■■□□ 2.36
YIF1A-202ENST00000376899 UBR3Q6ZT12 1888 aa29.8■■■□□ 2.36
YIF1A-202ENST00000376899 TTC5Q8N0Z6 440 aa29.79■■■□□ 2.36
YIF1A-202ENST00000376899 NEUROD2Q15784 382 aa29.78■■■□□ 2.36
YIF1A-202ENST00000376899 VSIG10Q8N0Z9 540 aa29.77■■■□□ 2.36
YIF1A-202ENST00000376899 MYH14Q7Z406 1995 aaKnown RBP29.75■■■□□ 2.35
YIF1A-202ENST00000376899 ZNF496Q96IT1 587 aaPredicted RBP29.75■■■□□ 2.35
YIF1A-202ENST00000376899 HEG1Q9ULI3 1381 aa29.75■■■□□ 2.35
YIF1A-202ENST00000376899 KCNQ3O43525 872 aa29.74■■■□□ 2.35
YIF1A-202ENST00000376899 CNTNAP4Q9C0A0 1308 aa29.73■■■□□ 2.35
YIF1A-202ENST00000376899 FAM9BQ8IZU0 186 aa29.73■■■□□ 2.35
YIF1A-202ENST00000376899 PNPLA7Q6ZV29 1317 aa29.72■■■□□ 2.35
YIF1A-202ENST00000376899 NCBP3Q53F19 620 aaKnown RBP29.72■■■□□ 2.35
YIF1A-202ENST00000376899 RC3H1Q5TC82 1133 aaKnown RBP29.72■■■□□ 2.35
YIF1A-202ENST00000376899 AK7Q96M32 723 aa29.72■■■□□ 2.35
YIF1A-202ENST00000376899 FMNL2Q96PY5 1086 aa29.72■■■□□ 2.35
YIF1A-202ENST00000376899 TFCP2L1Q9NZI6 479 aa29.72■■■□□ 2.35
YIF1A-202ENST00000376899 DNAJC10Q8IXB1 793 aa29.71■■■□□ 2.35
YIF1A-202ENST00000376899 BABAM1Q9NWV8 329 aa29.71■■■□□ 2.35
YIF1A-202ENST00000376899 MIER1Q8N108 512 aa29.7■■■□□ 2.35
YIF1A-202ENST00000376899 PDGFDQ9GZP0 370 aaPredicted RBP29.69■■■□□ 2.34
YIF1A-202ENST00000376899 LRP5O75197 1615 aa29.68■■■□□ 2.34
YIF1A-202ENST00000376899 CCDC27Q2M243 656 aa29.68■■■□□ 2.34
YIF1A-202ENST00000376899 MIS18AQ9NYP9 233 aa29.68■■■□□ 2.34
YIF1A-202ENST00000376899 CYP19A1P11511 503 aaPredicted RBP29.67■■■□□ 2.34
YIF1A-202ENST00000376899 LAMB4A4D0S4 1761 aa29.67■■■□□ 2.34
YIF1A-202ENST00000376899 CRKLP46109 303 aaKnown RBP29.66■■■□□ 2.34
YIF1A-202ENST00000376899 AMIGO3Q86WK7 504 aa29.66■■■□□ 2.34
YIF1A-202ENST00000376899 FLAD1Q8NFF5 587 aa29.66■■■□□ 2.34
YIF1A-202ENST00000376899 COL24A1Q17RW2 1714 aa29.65■■■□□ 2.34
YIF1A-202ENST00000376899 GNPATO15228 680 aa29.65■■■□□ 2.34
YIF1A-202ENST00000376899 SSFA2P28290 1259 aa29.65■■■□□ 2.34
YIF1A-202ENST00000376899 TEX13AQ9BXU3 409 aaPredicted RBP29.65■■■□□ 2.34
YIF1A-202ENST00000376899 TSPYL4Q9UJ04 414 aa29.64■■■□□ 2.34
YIF1A-202ENST00000376899 EIF4A1P60842 406 aaKnown RBP29.63■■■□□ 2.33
YIF1A-202ENST00000376899 INTS5Q6P9B9 1019 aaKnown RBP29.63■■■□□ 2.33
YIF1A-202ENST00000376899 COL23A1Q86Y22 540 aaPredicted RBP29.63■■■□□ 2.33
YIF1A-202ENST00000376899 CHL1O00533 1208 aa29.62■■■□□ 2.33
YIF1A-202ENST00000376899 RPS6KA4O75676 772 aa29.62■■■□□ 2.33
YIF1A-202ENST00000376899 CALD1Q05682 793 aaKnown RBP29.62■■■□□ 2.33
YIF1A-202ENST00000376899 CCDC87Q9NVE4 849 aa29.62■■■□□ 2.33
YIF1A-202ENST00000376899 C4AP0C0L4 1744 aa29.62■■■□□ 2.33
YIF1A-202ENST00000376899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.61■■■□□ 2.33
YIF1A-202ENST00000376899 STARD3NLO95772 234 aa29.61■■■□□ 2.33
YIF1A-202ENST00000376899 SNRPA1P09661 255 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms