RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 LGR5O75473 907 aa8.73□□□□□ -1.01
SSX3-203ENST00000376895 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
SSX3-203ENST00000376895 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
SSX3-203ENST00000376895 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
SSX3-203ENST00000376895 CUX1P39880 1505 aa8.73□□□□□ -1.01
SSX3-203ENST00000376895 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
SSX3-203ENST00000376895 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
SSX3-203ENST00000376895 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 FOXO3O43524 673 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 C21orf2O43822 256 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 ICMTO60725 284 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 IGFBP4P22692 258 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 OSBPL3Q9H4L5 887 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
SSX3-203ENST00000376895 SOGA1O94964 1423 aa8.71□□□□□ -1.01
SSX3-203ENST00000376895 CD2BP2O95400 341 aaKnown RBP8.71□□□□□ -1.02
SSX3-203ENST00000376895 GDF10P55107 478 aa8.71□□□□□ -1.02
SSX3-203ENST00000376895 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.02
SSX3-203ENST00000376895 CYP2U1Q7Z449 544 aa8.71□□□□□ -1.02
SSX3-203ENST00000376895 MPNDQ8N594 471 aa8.71□□□□□ -1.02
SSX3-203ENST00000376895 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.02
SSX3-203ENST00000376895 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
SSX3-203ENST00000376895 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
SSX3-203ENST00000376895 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
SSX3-203ENST00000376895 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 SCNN1DP51172 638 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
SSX3-203ENST00000376895 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 CCDC116Q8IYX3 515 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
SSX3-203ENST00000376895 RNF166Q96A37 237 aaPredicted RBP8.7□□□□□ -1.02
SSX3-203ENST00000376895 ANO2Q9NQ90 1003 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 SEPT3Q9UH03 358 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 WDR62O43379 1518 aa8.7□□□□□ -1.02
SSX3-203ENST00000376895 ADH1CP00326 375 aa8.69□□□□□ -1.02
SSX3-203ENST00000376895 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
SSX3-203ENST00000376895 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
SSX3-203ENST00000376895 INHAP05111 366 aa8.68□□□□□ -1.02
SSX3-203ENST00000376895 MYT1Q01538 1121 aa8.68□□□□□ -1.02
SSX3-203ENST00000376895 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
SSX3-203ENST00000376895 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
SSX3-203ENST00000376895 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
SSX3-203ENST00000376895 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
SSX3-203ENST00000376895 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
SSX3-203ENST00000376895 MAPK1P28482 360 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 NR5A1Q13285 461 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 SCG3Q8WXD2 468 aaKnown RBP8.67□□□□□ -1.02
SSX3-203ENST00000376895 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
SSX3-203ENST00000376895 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 ETNK1Q9HBU6 452 aa8.67□□□□□ -1.02
SSX3-203ENST00000376895 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
SSX3-203ENST00000376895 IFT140Q96RY7 1462 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 GRM5P41594 1212 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 EPHA4P54764 986 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 PPP1R26Q5T8A7 1209 aaPredicted RBP8.66□□□□□ -1.02
SSX3-203ENST00000376895 TSPAN10Q9H1Z9 355 aaPredicted RBP8.66□□□□□ -1.02
SSX3-203ENST00000376895 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 DCTN4Q9UJW0 460 aa8.66□□□□□ -1.02
SSX3-203ENST00000376895 CUX2O14529 1486 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 KIF27Q86VH2 1401 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 ANKRD33BA6NCL7 494 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 STAU1O95793 577 aaKnown RBP8.65□□□□□ -1.02
SSX3-203ENST00000376895 GNRH1P01148 92 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
SSX3-203ENST00000376895 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
SSX3-203ENST00000376895 TDRD9Q8NDG6 1382 aaKnown RBP8.64□□□□□ -1.03
SSX3-203ENST00000376895 UNCXA6NJT0 531 aa8.64□□□□□ -1.03
SSX3-203ENST00000376895 WNT7AO00755 349 aa8.64□□□□□ -1.03
SSX3-203ENST00000376895 LILRA1O75019 489 aa8.64□□□□□ -1.03
SSX3-203ENST00000376895 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
SSX3-203ENST00000376895 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
SSX3-203ENST00000376895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSX3-203ENST00000376895 EMILIN1Q9Y6C2 1016 aa8.64□□□□□ -1.03
SSX3-203ENST00000376895 SIAH2O43255 324 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 PPP1R12BO60237 982 aaPredicted RBP8.63□□□□□ -1.03
SSX3-203ENST00000376895 ARHGAP4P98171 946 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
SSX3-203ENST00000376895 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 CHMP7Q8WUX9 453 aaPredicted RBP8.63□□□□□ -1.03
SSX3-203ENST00000376895 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SSX3-203ENST00000376895 FAM13AO94988 1023 aa8.62□□□□□ -1.03
SSX3-203ENST00000376895 NR3C2P08235 984 aa8.62□□□□□ -1.03
SSX3-203ENST00000376895 ZNF16P17020 682 aaPredicted RBP8.62□□□□□ -1.03
SSX3-203ENST00000376895 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
SSX3-203ENST00000376895 SCHIP1Q9P0W5 487 aaPredicted RBP8.62□□□□□ -1.03
SSX3-203ENST00000376895 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
SSX3-203ENST00000376895 ABCA10Q8WWZ4 1543 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms