RNA–Protein interactions for RNA: ENST00000375890.8

CASP9-203, Transcript of caspase 9, humanhuman

TSL 2 BASIC

Gene CASP9, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-203ENST00000375890 FANCIQ9NVI1 1328 aa28.46■■■□□ 2.15
CASP9-203ENST00000375890 CT47B1P0C2W7 299 aaPredicted RBP28.46■■■□□ 2.15
CASP9-203ENST00000375890 SPINK5Q9NQ38 1064 aaPredicted RBP28.46■■■□□ 2.15
CASP9-203ENST00000375890 TSPYL4Q9UJ04 414 aa28.46■■■□□ 2.15
CASP9-203ENST00000375890 LAS1LQ9Y4W2 734 aaKnown RBP28.46■■■□□ 2.15
CASP9-203ENST00000375890 BTBD11A6QL63 1104 aa28.44■■■□□ 2.14
CASP9-203ENST00000375890 MBIPQ9NS73 344 aa28.43■■■□□ 2.14
CASP9-203ENST00000375890 TMOD3Q9NYL9 352 aa28.43■■■□□ 2.14
CASP9-203ENST00000375890 SOS1Q07889 1333 aaPredicted RBP28.43■■■□□ 2.14
CASP9-203ENST00000375890 TOGARAM1Q9Y4F4 1720 aa28.42■■■□□ 2.14
CASP9-203ENST00000375890 NFATC2IPQ8NCF5 419 aa28.42■■■□□ 2.14
CASP9-203ENST00000375890 KDM3BQ7LBC6 1761 aa28.41■■■□□ 2.14
CASP9-203ENST00000375890 CHMP4AQ9BY43 222 aa28.41■■■□□ 2.14
CASP9-203ENST00000375890 KRT27Q7Z3Y8 459 aa28.4■■■□□ 2.14
CASP9-203ENST00000375890 ZNF428Q96B54 188 aa28.4■■■□□ 2.14
CASP9-203ENST00000375890 DOT1LQ8TEK3 1739 aa28.4■■■□□ 2.14
CASP9-203ENST00000375890 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
CASP9-203ENST00000375890 TSR2Q969E8 191 aaKnown RBP28.38■■■□□ 2.13
CASP9-203ENST00000375890 ITGB4P16144 1822 aa28.37■■■□□ 2.13
CASP9-203ENST00000375890 TTC5Q8N0Z6 440 aa28.37■■■□□ 2.13
CASP9-203ENST00000375890 ZNF790Q6PG37 636 aa28.37■■■□□ 2.13
CASP9-203ENST00000375890 FAM196AQ6ZSG2 479 aa28.37■■■□□ 2.13
CASP9-203ENST00000375890 RGS12O14924 1447 aa28.36■■■□□ 2.13
CASP9-203ENST00000375890 BRWD3Q6RI45 1802 aa28.36■■■□□ 2.13
CASP9-203ENST00000375890 PAPPAQ13219 1627 aa28.34■■■□□ 2.13
CASP9-203ENST00000375890 HOXB7P09629 217 aa28.34■■■□□ 2.13
CASP9-203ENST00000375890 NHSQ6T4R5 1651 aa28.33■■■□□ 2.13
CASP9-203ENST00000375890 PRIM1P49642 420 aaKnown RBP28.33■■■□□ 2.13
CASP9-203ENST00000375890 EXOSC9Q06265 439 aaKnown RBP28.33■■■□□ 2.13
CASP9-203ENST00000375890 MIS18AQ9NYP9 233 aa28.32■■■□□ 2.12
CASP9-203ENST00000375890 EIF4A1P60842 406 aaKnown RBP28.31■■■□□ 2.12
CASP9-203ENST00000375890 PIGBQ92521 554 aa28.31■■■□□ 2.12
CASP9-203ENST00000375890 SYTL4Q96C24 671 aaPredicted RBP28.31■■■□□ 2.12
CASP9-203ENST00000375890 KAT6BQ8WYB5 2073 aa28.3■■■□□ 2.12
CASP9-203ENST00000375890 FMNL2Q96PY5 1086 aa28.3■■■□□ 2.12
CASP9-203ENST00000375890 TWISTNBQ3B726 338 aaPredicted RBP28.29■■■□□ 2.12
CASP9-203ENST00000375890 SMARCC1Q92922 1105 aaPredicted RBP28.29■■■□□ 2.12
CASP9-203ENST00000375890 UBR2Q8IWV8 1755 aa28.29■■■□□ 2.12
CASP9-203ENST00000375890 HEG1Q9ULI3 1381 aa28.28■■■□□ 2.12
CASP9-203ENST00000375890 SBF2Q86WG5 1849 aa28.26■■■□□ 2.12
CASP9-203ENST00000375890 ACSBG1Q96GR2 724 aa28.26■■■□□ 2.12
CASP9-203ENST00000375890 RCAN3Q9UKA8 241 aa28.26■■■□□ 2.12
CASP9-203ENST00000375890 VSIG10Q8N0Z9 540 aa28.25■■■□□ 2.11
CASP9-203ENST00000375890 SLC39A6Q13433 755 aa28.24■■■□□ 2.11
CASP9-203ENST00000375890 C8orf58Q8NAV2 365 aa28.24■■■□□ 2.11
CASP9-203ENST00000375890 BCL11BQ9C0K0 894 aaPredicted RBP28.24■■■□□ 2.11
CASP9-203ENST00000375890 VAMP4O75379 141 aa28.24■■■□□ 2.11
CASP9-203ENST00000375890 ALDH1L2Q3SY69 923 aa28.24■■■□□ 2.11
CASP9-203ENST00000375890 ATG3Q9NT62 314 aa28.24■■■□□ 2.11
CASP9-203ENST00000375890 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
CASP9-203ENST00000375890 SNRPA1P09661 255 aaKnown RBP28.23■■■□□ 2.11
CASP9-203ENST00000375890 TEX13AQ9BXU3 409 aaPredicted RBP28.23■■■□□ 2.11
CASP9-203ENST00000375890 GIGYF1O75420 1035 aaPredicted RBP28.22■■■□□ 2.11
CASP9-203ENST00000375890 HMGB2P26583 209 aaKnown RBP28.22■■■□□ 2.11
CASP9-203ENST00000375890 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
CASP9-203ENST00000375890 KCNQ3O43525 872 aa28.21■■■□□ 2.11
CASP9-203ENST00000375890 TSPYL6Q8N831 410 aa28.2■■■□□ 2.1
CASP9-203ENST00000375890 ASAP1Q9ULH1 1129 aa28.2■■■□□ 2.1
CASP9-203ENST00000375890 ZNF831Q5JPB2 1677 aa28.19■■■□□ 2.1
CASP9-203ENST00000375890 KCNQ2O43526 872 aa28.19■■■□□ 2.1
CASP9-203ENST00000375890 CCDC30Q5VVM6 783 aa28.19■■■□□ 2.1
CASP9-203ENST00000375890 BTAF1O14981 1849 aa28.19■■■□□ 2.1
CASP9-203ENST00000375890 RARSP54136 660 aaKnown RBP28.18■■■□□ 2.1
CASP9-203ENST00000375890 FAM182BQ5T319 152 aa28.18■■■□□ 2.1
CASP9-203ENST00000375890 CICQ96RK0 1608 aaPredicted RBP28.17■■■□□ 2.1
CASP9-203ENST00000375890 ELL2O00472 640 aaPredicted RBP28.17■■■□□ 2.1
CASP9-203ENST00000375890 BRPF1P55201 1214 aaPredicted RBP28.17■■■□□ 2.1
CASP9-203ENST00000375890 PALLDQ8WX93 1383 aa28.17■■■□□ 2.1
CASP9-203ENST00000375890 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
CASP9-203ENST00000375890 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.16■■■□□ 2.1
CASP9-203ENST00000375890 CACNA1FO60840 1977 aa28.16■■■□□ 2.1
CASP9-203ENST00000375890 KRT24Q2M2I5 525 aa28.15■■■□□ 2.1
CASP9-203ENST00000375890 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
CASP9-203ENST00000375890 STK31Q9BXU1 1019 aa28.15■■■□□ 2.1
CASP9-203ENST00000375890 ERBB4Q15303 1308 aa28.15■■■□□ 2.1
CASP9-203ENST00000375890 PTCD1O75127 700 aaKnown RBP28.14■■■□□ 2.1
CASP9-203ENST00000375890 KIF16BQ96L93 1317 aa28.13■■■□□ 2.09
CASP9-203ENST00000375890 RBM42Q9BTD8 480 aaKnown RBP28.12■■■□□ 2.09
CASP9-203ENST00000375890 SMC4Q9NTJ3 1288 aa28.12■■■□□ 2.09
CASP9-203ENST00000375890 STARD3NLO95772 234 aa28.11■■■□□ 2.09
CASP9-203ENST00000375890 LOC102724428A0A0B4J2F2 783 aa28.11■■■□□ 2.09
CASP9-203ENST00000375890 SIK1P57059 783 aa28.11■■■□□ 2.09
CASP9-203ENST00000375890 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
CASP9-203ENST00000375890 C5P01031 1676 aa28.1■■■□□ 2.09
CASP9-203ENST00000375890 TRIM37O94972 964 aa28.1■■■□□ 2.09
CASP9-203ENST00000375890 DBF4Q9UBU7 674 aaPredicted RBP28.1■■■□□ 2.09
CASP9-203ENST00000375890 LY75O60449 1722 aa28.09■■■□□ 2.09
CASP9-203ENST00000375890 RNF123Q5XPI4 1314 aa28.08■■■□□ 2.09
CASP9-203ENST00000375890 IPO8O15397 1037 aaKnown RBP28.08■■■□□ 2.09
CASP9-203ENST00000375890 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
CASP9-203ENST00000375890 ATP6V1AP38606 617 aa28.06■■■□□ 2.08
CASP9-203ENST00000375890 RGPD3A6NKT7 1758 aaPredicted RBP28.05■■■□□ 2.08
CASP9-203ENST00000375890 RGPD4Q7Z3J3 1758 aa28.05■■■□□ 2.08
CASP9-203ENST00000375890 PLSCR1O15162 318 aa28.05■■■□□ 2.08
CASP9-203ENST00000375890 MS4A1P11836 297 aa28.05■■■□□ 2.08
CASP9-203ENST00000375890 SLC27A3Q5K4L6 730 aa28.05■■■□□ 2.08
CASP9-203ENST00000375890 MRPL50Q8N5N7 158 aaKnown RBP28.05■■■□□ 2.08
CASP9-203ENST00000375890 ARHGAP45Q92619 1136 aa28.05■■■□□ 2.08
CASP9-203ENST00000375890 DDX21Q9NR30 783 aaKnown RBP eCLIP28.05■■■□□ 2.08
CASP9-203ENST00000375890 HYPKQ9NX55 129 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms