RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
PTPRT-204ENST00000373190 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
PTPRT-204ENST00000373190 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
PTPRT-204ENST00000373190 DNAAF4Q8WXU2 420 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 SIL1Q9H173 461 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 RPAP2Q8IXW5 612 aaPredicted RBP10.23□□□□□ -0.77
PTPRT-204ENST00000373190 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 PTPN23Q9H3S7 1636 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 MX1P20591 662 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 ALS2CR12Q96Q35 445 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC150Q8NCX0 1101 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 DDX19AQ9NUU7 478 aaKnown RBP10.22□□□□□ -0.77
PTPRT-204ENST00000373190 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 SPECC1LQ69YQ0 1117 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 UBE2HP62256 183 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 UBAC1Q9BSL1 405 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 USO1O60763 962 aaKnown RBP10.22□□□□□ -0.77
PTPRT-204ENST00000373190 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
PTPRT-204ENST00000373190 VPS36Q86VN1 386 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
PTPRT-204ENST00000373190 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 NF2P35240 595 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 BAG4O95429 457 aaKnown RBP10.22□□□□□ -0.77
PTPRT-204ENST00000373190 DESP17661 470 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC184Q52MB2 194 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 FKBP15Q5T1M5 1219 aa10.22□□□□□ -0.77
PTPRT-204ENST00000373190 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-204ENST00000373190 LRSAM1Q6UWE0 723 aa10.21□□□□□ -0.77
PTPRT-204ENST00000373190 TMC6Q7Z403 805 aa10.21□□□□□ -0.77
PTPRT-204ENST00000373190 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-204ENST00000373190 ANKRD30BQ9BXX2 1392 aa10.21□□□□□ -0.77
PTPRT-204ENST00000373190 LIMCH1Q9UPQ0 1083 aa10.21□□□□□ -0.77
PTPRT-204ENST00000373190 SYNJ1O43426 1573 aa10.21□□□□□ -0.77
PTPRT-204ENST00000373190 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-204ENST00000373190 YEATS4O95619 227 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 KLHL10Q6JEL2 608 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 CNNM1Q9NRU3 951 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTPRT-204ENST00000373190 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 GOPCQ9HD26 462 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 GPRASP1Q5JY77 1395 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 IRX3P78415 501 aaPredicted RBP10.21□□□□□ -0.78
PTPRT-204ENST00000373190 WWC2Q6AWC2 1192 aa10.21□□□□□ -0.78
PTPRT-204ENST00000373190 PLEKHO1Q53GL0 409 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-204ENST00000373190 SOGA3Q5TF21 947 aa10.2□□□□□ -0.78
PTPRT-204ENST00000373190 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
PTPRT-204ENST00000373190 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPRT-204ENST00000373190 RAB11FIP3O75154 756 aa10.2□□□□□ -0.78
PTPRT-204ENST00000373190 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
PTPRT-204ENST00000373190 ZFP91Q96JP5 570 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-204ENST00000373190 ZNF165P49910 485 aa10.2□□□□□ -0.78
PTPRT-204ENST00000373190 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
PTPRT-204ENST00000373190 PHAXQ9H814 394 aaKnown RBP10.2□□□□□ -0.78
PTPRT-204ENST00000373190 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 TAOK3Q9H2K8 898 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 C11orf95C9JLR9 678 aaPredicted RBP10.19□□□□□ -0.78
PTPRT-204ENST00000373190 GLRX3O76003 335 aaKnown RBP10.19□□□□□ -0.78
PTPRT-204ENST00000373190 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
PTPRT-204ENST00000373190 XRCC6P12956 609 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPRT-204ENST00000373190 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 NBPF8Q3BBV2 869 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 CACNA2D4Q7Z3S7 1137 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 HSPA4P34932 840 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 BMP2KLQ5H9B9 411 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 GSTTP1A0A1W2PQM5 241 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 NLRP6P59044 892 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 CCDC178Q5BJE1 867 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 SPATA24Q86W54 205 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 CEP112Q8N8E3 955 aa10.19□□□□□ -0.78
PTPRT-204ENST00000373190 STX6O43752 255 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 C8orf76Q96K31 380 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 IL1RAPL2Q9NP60 686 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 TDO2P48775 406 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 HS1BP3Q53T59 392 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 EXOC6BQ9Y2D4 811 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 CETN2P41208 172 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 SULT6B1Q6IMI4 303 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 NOLC1Q14978 699 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTPRT-204ENST00000373190 C20orf194Q5TEA3 1177 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 PRPF40BQ6NWY9 871 aaKnown RBP10.18□□□□□ -0.78
PTPRT-204ENST00000373190 STAMBPO95630 424 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 TMPOP42166 694 aaKnown RBP10.18□□□□□ -0.78
PTPRT-204ENST00000373190 ZKSCAN5Q9Y2L8 839 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 FCHSD2O94868 740 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 CEP63Q96MT8 703 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 HCLS1P14317 486 aaPredicted RBP10.18□□□□□ -0.78
PTPRT-204ENST00000373190 HLTFQ14527 1009 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTPRT-204ENST00000373190 ANKS4BQ8N8V4 417 aa10.18□□□□□ -0.78
PTPRT-204ENST00000373190 CNNM3Q8NE01 707 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms