RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 RASSF4Q9H2L5 321 aa14.59□□□□□ -0.07
RAP1A-202ENST00000369709 ATAD2Q6PL18 1390 aa14.59□□□□□ -0.07
RAP1A-202ENST00000369709 KIF2AO00139 706 aaPredicted RBP14.59□□□□□ -0.07
RAP1A-202ENST00000369709 ZBTB7BO15156 539 aaPredicted RBP14.59□□□□□ -0.07
RAP1A-202ENST00000369709 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
RAP1A-202ENST00000369709 NECAB1Q8N987 351 aa14.58□□□□□ -0.07
RAP1A-202ENST00000369709 ZNF428Q96B54 188 aa14.58□□□□□ -0.07
RAP1A-202ENST00000369709 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.07
RAP1A-202ENST00000369709 MAGI3Q5TCQ9 1506 aa14.58□□□□□ -0.07
RAP1A-202ENST00000369709 NFE2L2Q16236 605 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 ARHGAP29Q52LW3 1261 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 TSPYL6Q8N831 410 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 TMC6Q7Z403 805 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 ESYT1Q9BSJ8 1104 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 ZSWIM4Q9H7M6 989 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 PATL2C9JE40 543 aaKnown RBP14.58□□□□□ -0.08
RAP1A-202ENST00000369709 GTF2E1P29083 439 aaPredicted RBP14.58□□□□□ -0.08
RAP1A-202ENST00000369709 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
RAP1A-202ENST00000369709 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
RAP1A-202ENST00000369709 GNAI3P08754 354 aa14.57□□□□□ -0.08
RAP1A-202ENST00000369709 FAM193AP78312 1265 aa14.57□□□□□ -0.08
RAP1A-202ENST00000369709 FCHSD2O94868 740 aa14.57□□□□□ -0.08
RAP1A-202ENST00000369709 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
RAP1A-202ENST00000369709 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
RAP1A-202ENST00000369709 MBIPQ9NS73 344 aa14.57□□□□□ -0.08
RAP1A-202ENST00000369709 ADGRF5Q8IZF2 1346 aa14.57□□□□□ -0.08
RAP1A-202ENST00000369709 DHX37Q8IY37 1157 aaKnown RBP14.57□□□□□ -0.08
RAP1A-202ENST00000369709 FBLN1P23142 703 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 ZSCAN31Q96LW9 406 aaPredicted RBP14.56□□□□□ -0.08
RAP1A-202ENST00000369709 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 SYT10Q6XYQ8 523 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 PDE1AP54750 535 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 DNAI1Q9UI46 699 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 BRD1O95696 1058 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
RAP1A-202ENST00000369709 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 RSPH14Q9UHP6 348 aa14.56□□□□□ -0.08
RAP1A-202ENST00000369709 FAM83GA6ND36 823 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 AFAP1Q8N556 730 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 NEK11Q8NG66 645 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 MEIS3Q99687 375 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 CCDC69A6NI79 296 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 NEMFO60524 1076 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 RDXP35241 583 aaKnown RBP14.55□□□□□ -0.08
RAP1A-202ENST00000369709 SCAND2PQ9GZW5 306 aaPredicted RBP14.55□□□□□ -0.08
RAP1A-202ENST00000369709 EIF3JO75822 258 aaKnown RBP14.55□□□□□ -0.08
RAP1A-202ENST00000369709 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
RAP1A-202ENST00000369709 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
RAP1A-202ENST00000369709 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
RAP1A-202ENST00000369709 OLFM4Q6UX06 510 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 CPA1P15085 419 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 SYT1P21579 422 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 NAA30Q147X3 362 aaPredicted RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 DCTPP1Q9H773 170 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 CASQ1P31415 396 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 CCT4P50991 539 aaKnown RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 ZNF215Q9UL58 517 aaPredicted RBP14.54□□□□□ -0.08
RAP1A-202ENST00000369709 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
RAP1A-202ENST00000369709 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 IRX5P78411 483 aaPredicted RBP14.53□□□□□ -0.08
RAP1A-202ENST00000369709 STK38Q15208 465 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 ERO1AQ96HE7 468 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 BIN1O00499 593 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 TPM1P09493 284 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 BLOC1S2Q6QNY1 142 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 MCM10Q7L590 875 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
RAP1A-202ENST00000369709 CFAP100Q494V2 611 aa14.53□□□□□ -0.08
RAP1A-202ENST00000369709 PLB1Q6P1J6 1458 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 ERLIN1O75477 346 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 AK2P54819 239 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 INTS4Q96HW7 963 aaKnown RBP14.52□□□□□ -0.08
RAP1A-202ENST00000369709 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 FAM173BQ6P4H8 233 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 CLASRPQ8N2M8 674 aaKnown RBP14.52□□□□□ -0.08
RAP1A-202ENST00000369709 C8orf58Q8NAV2 365 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 TCEANC2Q96MN5 208 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 SIL1Q9H173 461 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 ANO10Q9NW15 660 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 CABP1Q9NZU7 370 aa14.52□□□□□ -0.08
RAP1A-202ENST00000369709 ISM2Q6H9L7 571 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 CFAP45Q9UL16 551 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
RAP1A-202ENST00000369709 NCBP1Q09161 790 aaKnown RBP14.52□□□□□ -0.09
RAP1A-202ENST00000369709 ANKRD44Q8N8A2 993 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 DRC1Q96MC2 740 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
RAP1A-202ENST00000369709 A2MP01023 1474 aa14.52□□□□□ -0.09
RAP1A-202ENST00000369709 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms