RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
DKC1-201ENST00000369550 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
DKC1-201ENST00000369550 BCL2L12Q9HB09 334 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 ANO2Q9NQ90 1003 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 PTPRMP28827 1452 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 CD163L1Q9NR16 1453 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 PDE1AP54750 535 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 CCDC183Q5T5S1 534 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 MEIS3Q99687 375 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 PALD1Q9ULE6 856 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 MSH6P52701 1360 aa20.42■□□□□ 0.86
DKC1-201ENST00000369550 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
DKC1-201ENST00000369550 PDCL2Q8N4E4 241 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
DKC1-201ENST00000369550 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 HMMRO75330 724 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
DKC1-201ENST00000369550 SPTLC3Q9NUV7 552 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 A2ML1A8K2U0 1454 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 SPDYE4A6NLX3 237 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
DKC1-201ENST00000369550 KRT24Q2M2I5 525 aa20.4■□□□□ 0.86
DKC1-201ENST00000369550 ESYT1Q9BSJ8 1104 aa20.4■□□□□ 0.86
DKC1-201ENST00000369550 MLECQ14165 292 aa20.39■□□□□ 0.85
DKC1-201ENST00000369550 EMILIN1Q9Y6C2 1016 aa20.39■□□□□ 0.85
DKC1-201ENST00000369550 RIMS2Q9UQ26 1411 aa20.39■□□□□ 0.85
DKC1-201ENST00000369550 KIF20AO95235 890 aa20.39■□□□□ 0.85
DKC1-201ENST00000369550 DIAPH3Q9NSV4 1193 aa20.39■□□□□ 0.85
DKC1-201ENST00000369550 LETM1O95202 739 aaPredicted RBP20.38■□□□□ 0.85
DKC1-201ENST00000369550 MX1P20591 662 aa20.38■□□□□ 0.85
DKC1-201ENST00000369550 RILPL2Q969X0 211 aa20.38■□□□□ 0.85
DKC1-201ENST00000369550 CDK19Q9BWU1 502 aa20.38■□□□□ 0.85
DKC1-201ENST00000369550 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
DKC1-201ENST00000369550 TRIM6-TRIM34B2RNG4 842 aa20.37■□□□□ 0.85
DKC1-201ENST00000369550 KDM4AO75164 1064 aa20.37■□□□□ 0.85
DKC1-201ENST00000369550 HAP1P54257 671 aaPredicted RBP20.37■□□□□ 0.85
DKC1-201ENST00000369550 ANAPC15P60006 121 aa20.37■□□□□ 0.85
DKC1-201ENST00000369550 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.37■□□□□ 0.85
DKC1-201ENST00000369550 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
DKC1-201ENST00000369550 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
DKC1-201ENST00000369550 IL13P35225 146 aa20.36■□□□□ 0.85
DKC1-201ENST00000369550 RIOK3O14730 519 aaKnown RBP20.35■□□□□ 0.85
DKC1-201ENST00000369550 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
DKC1-201ENST00000369550 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
DKC1-201ENST00000369550 RGS12O14924 1447 aa20.34■□□□□ 0.85
DKC1-201ENST00000369550 U2AF2P26368 475 aaKnown RBP eCLIP20.34■□□□□ 0.852e-7■■■■□ 22.6
DKC1-201ENST00000369550 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
DKC1-201ENST00000369550 UBE2HP62256 183 aa20.33■□□□□ 0.85
DKC1-201ENST00000369550 KIAA1524Q8TCG1 905 aa20.33■□□□□ 0.85
DKC1-201ENST00000369550 PTPRCP08575 1304 aa20.33■□□□□ 0.84
DKC1-201ENST00000369550 SPC24Q8NBT2 197 aa20.33■□□□□ 0.84
DKC1-201ENST00000369550 FIBPO43427 364 aa20.32■□□□□ 0.84
DKC1-201ENST00000369550 TMEM87AQ8NBN3 555 aa20.32■□□□□ 0.84
DKC1-201ENST00000369550 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
DKC1-201ENST00000369550 CHMLP26374 656 aa20.32■□□□□ 0.84
DKC1-201ENST00000369550 PYCARDQ9ULZ3 195 aa20.32■□□□□ 0.84
DKC1-201ENST00000369550 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
DKC1-201ENST00000369550 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
DKC1-201ENST00000369550 GOLGA6L6A8MZA4 724 aa20.31■□□□□ 0.84
DKC1-201ENST00000369550 TPM3P06753 285 aa20.31■□□□□ 0.84
DKC1-201ENST00000369550 SLC4A2P04920 1241 aa20.3■□□□□ 0.84
DKC1-201ENST00000369550 IGSF3O75054 1194 aa20.3■□□□□ 0.84
DKC1-201ENST00000369550 LRRCC1Q9C099 1032 aa20.3■□□□□ 0.84
DKC1-201ENST00000369550 KCNF1Q9H3M0 494 aa20.3■□□□□ 0.84
DKC1-201ENST00000369550 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
DKC1-201ENST00000369550 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
DKC1-201ENST00000369550 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
DKC1-201ENST00000369550 ANKRD7Q92527 254 aa20.28■□□□□ 0.84
DKC1-201ENST00000369550 RPAP1Q9BWH6 1393 aaPredicted RBP20.28■□□□□ 0.84
DKC1-201ENST00000369550 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
DKC1-201ENST00000369550 STX6O43752 255 aa20.27■□□□□ 0.84
DKC1-201ENST00000369550 F6X3S4 739 aa20.27■□□□□ 0.83
DKC1-201ENST00000369550 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.83
DKC1-201ENST00000369550 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 AP5Z1O43299 807 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 GNAI2P04899 355 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 MCM10Q7L590 875 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 NME9Q86XW9 330 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
DKC1-201ENST00000369550 CTIFO43310 598 aaKnown RBP20.25■□□□□ 0.83
DKC1-201ENST00000369550 SYT1P21579 422 aa20.25■□□□□ 0.83
DKC1-201ENST00000369550 FEZ1Q99689 392 aa20.25■□□□□ 0.83
DKC1-201ENST00000369550 TCHHQ07283 1943 aa20.25■□□□□ 0.83
DKC1-201ENST00000369550 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
DKC1-201ENST00000369550 ZNF771Q7L3S4 317 aaPredicted RBP20.25■□□□□ 0.83
DKC1-201ENST00000369550 F13A1P00488 732 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 LARP6Q9BRS8 491 aaKnown RBP20.24■□□□□ 0.83
DKC1-201ENST00000369550 TNRQ92752 1358 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 CHL1O00533 1208 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 CCT4P50991 539 aaKnown RBP20.24■□□□□ 0.83
DKC1-201ENST00000369550 FUCA2Q9BTY2 467 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 SMC3Q9UQE7 1217 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.24■□□□□ 0.83
DKC1-201ENST00000369550 SALL3Q9BXA9 1300 aa20.24■□□□□ 0.83
DKC1-201ENST00000369550 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms