RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
USF1-203ENST00000368021 OVOS2A0A0G2JMS6 1433 aa15.53■□□□□ 0.08
USF1-203ENST00000368021 PLIN1O60240 522 aa15.52■□□□□ 0.08
USF1-203ENST00000368021 TRIM37O94972 964 aa15.52■□□□□ 0.08
USF1-203ENST00000368021 ZNF530Q6P9A1 599 aaPredicted RBP15.52■□□□□ 0.08
USF1-203ENST00000368021 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.07
USF1-203ENST00000368021 IL17REQ8NFR9 667 aa15.52■□□□□ 0.07
USF1-203ENST00000368021 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.07
USF1-203ENST00000368021 MEGF6O75095 1541 aa15.51■□□□□ 0.07
USF1-203ENST00000368021 PARP4Q9UKK3 1724 aaKnown RBP15.51■□□□□ 0.07
USF1-203ENST00000368021 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
USF1-203ENST00000368021 C1orf141Q5JVX7 400 aa15.51■□□□□ 0.07
USF1-203ENST00000368021 ZCRB1Q8TBF4 217 aaKnown RBP15.5■□□□□ 0.07
USF1-203ENST00000368021 PKD1L3Q7Z443 1732 aa15.5■□□□□ 0.07
USF1-203ENST00000368021 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
USF1-203ENST00000368021 SPG7Q9UQ90 795 aa15.5■□□□□ 0.07
USF1-203ENST00000368021 ADAMTS7Q9UKP4 1686 aa15.49■□□□□ 0.07
USF1-203ENST00000368021 VAMP4O75379 141 aa15.49■□□□□ 0.07
USF1-203ENST00000368021 BRPF1P55201 1214 aaPredicted RBP15.49■□□□□ 0.07
USF1-203ENST00000368021 PDE3AQ14432 1141 aa15.49■□□□□ 0.07
USF1-203ENST00000368021 DEFB132Q7Z7B7 95 aa15.49■□□□□ 0.07
USF1-203ENST00000368021 TNS2Q63HR2 1409 aa15.48■□□□□ 0.07
USF1-203ENST00000368021 WNK3Q9BYP7 1800 aa15.48■□□□□ 0.07
USF1-203ENST00000368021 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
USF1-203ENST00000368021 PTF1AQ7RTS3 328 aa15.48■□□□□ 0.07
USF1-203ENST00000368021 ACSBG1Q96GR2 724 aa15.48■□□□□ 0.07
USF1-203ENST00000368021 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
USF1-203ENST00000368021 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
USF1-203ENST00000368021 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
USF1-203ENST00000368021 SMC4Q9NTJ3 1288 aa15.47■□□□□ 0.07
USF1-203ENST00000368021 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
USF1-203ENST00000368021 TSPYL6Q8N831 410 aa15.47■□□□□ 0.07
USF1-203ENST00000368021 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
USF1-203ENST00000368021 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
USF1-203ENST00000368021 KAT6BQ8WYB5 2073 aa15.46■□□□□ 0.07
USF1-203ENST00000368021 KIF16BQ96L93 1317 aa15.46■□□□□ 0.07
USF1-203ENST00000368021 RNMTO43148 476 aaKnown RBP15.46■□□□□ 0.07
USF1-203ENST00000368021 C20orf194Q5TEA3 1177 aa15.46■□□□□ 0.07
USF1-203ENST00000368021 SOS1Q07889 1333 aaPredicted RBP15.46■□□□□ 0.06
USF1-203ENST00000368021 KCNQ2O43526 872 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 CANXP27824 592 aaKnown RBP15.45■□□□□ 0.06
USF1-203ENST00000368021 IFNL2Q8IZJ0 200 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 BCL2L13Q9BXK5 485 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 LGR6Q9HBX8 967 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 APBA3O96018 575 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 PHKG2P15735 406 aa15.45■□□□□ 0.06
USF1-203ENST00000368021 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
USF1-203ENST00000368021 TEFQ10587 303 aa15.44■□□□□ 0.06
USF1-203ENST00000368021 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
USF1-203ENST00000368021 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
USF1-203ENST00000368021 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
USF1-203ENST00000368021 SCN11AQ9UI33 1791 aa15.44■□□□□ 0.06
USF1-203ENST00000368021 CYP27B1O15528 508 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 HSP90AB1P08238 724 aaKnown RBP15.43■□□□□ 0.06
USF1-203ENST00000368021 MS4A1P11836 297 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 SIPA1L3O60292 1781 aaPredicted RBP15.43■□□□□ 0.06
USF1-203ENST00000368021 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
USF1-203ENST00000368021 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
USF1-203ENST00000368021 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
USF1-203ENST00000368021 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
USF1-203ENST00000368021 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
USF1-203ENST00000368021 BAG6P46379 1132 aa15.42■□□□□ 0.06
USF1-203ENST00000368021 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
USF1-203ENST00000368021 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
USF1-203ENST00000368021 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
USF1-203ENST00000368021 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
USF1-203ENST00000368021 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
USF1-203ENST00000368021 MRC1P22897 1456 aa15.41■□□□□ 0.06
USF1-203ENST00000368021 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
USF1-203ENST00000368021 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
USF1-203ENST00000368021 EZH2Q15910 746 aaKnown RBP15.4■□□□□ 0.06
USF1-203ENST00000368021 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
USF1-203ENST00000368021 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
USF1-203ENST00000368021 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 HOXB7P09629 217 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 TRIM27P14373 513 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 AAMPQ13685 434 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 SLC52A2Q9HAB3 445 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 SHANK3Q9BYB0 1731 aa15.39■□□□□ 0.05
USF1-203ENST00000368021 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
USF1-203ENST00000368021 B4GALNT3Q6L9W6 998 aa15.38■□□□□ 0.05
USF1-203ENST00000368021 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
USF1-203ENST00000368021 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
USF1-203ENST00000368021 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
USF1-203ENST00000368021 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
USF1-203ENST00000368021 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
USF1-203ENST00000368021 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
USF1-203ENST00000368021 CACNA1FO60840 1977 aa15.38■□□□□ 0.05
USF1-203ENST00000368021 BCL9O00512 1426 aa15.37■□□□□ 0.05
USF1-203ENST00000368021 RLBP1P12271 317 aa15.37■□□□□ 0.05
USF1-203ENST00000368021 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
USF1-203ENST00000368021 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
USF1-203ENST00000368021 CAMKK2Q96RR4 588 aa15.36■□□□□ 0.05
USF1-203ENST00000368021 COG6Q9Y2V7 657 aa15.36■□□□□ 0.05
USF1-203ENST00000368021 MVPQ14764 893 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms