RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
RC3H1-203ENST00000367696 CEBPZQ03701 1054 aaKnown RBP9.78□□□□□ -0.84
RC3H1-203ENST00000367696 PES1O00541 588 aaKnown RBP9.78□□□□□ -0.84
RC3H1-203ENST00000367696 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 TRAPPC8Q9Y2L5 1435 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 NEMFO60524 1076 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 UBE2HP62256 183 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 DUOX2Q9NRD8 1548 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 ERICH2A1L162 156 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
RC3H1-203ENST00000367696 RHPN1Q8TCX5 695 aa9.78□□□□□ -0.84
RC3H1-203ENST00000367696 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
RC3H1-203ENST00000367696 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.84
RC3H1-203ENST00000367696 USP26Q9BXU7 913 aa9.77□□□□□ -0.84
RC3H1-203ENST00000367696 CTAGE5O15320 804 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 CEP126Q9P2H0 1117 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 TBC1D2BQ9UPU7 963 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 HSP90B2PQ58FF3 399 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 CEP85Q6P2H3 762 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 ZMYM4Q5VZL5 1548 aa9.77□□□□□ -0.85
RC3H1-203ENST00000367696 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 SIL1Q9H173 461 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 DBF4Q9UBU7 674 aaPredicted RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 CBFA2T2O43439 604 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 ZSCAN22P10073 491 aaPredicted RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 SBNO2Q9Y2G9 1366 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 SART3Q15020 963 aaKnown RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 PHACTR3Q96KR7 559 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 PDILTQ8N807 584 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 ADCY5O95622 1261 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 LARP1Q6PKG0 1096 aaKnown RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 KCNH5Q8NCM2 988 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 XBP1P17861 261 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 C16orf71Q8IYS4 520 aaPredicted RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 ERCC4Q92889 916 aaPredicted RBP9.76□□□□□ -0.85
RC3H1-203ENST00000367696 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
RC3H1-203ENST00000367696 PTPN14Q15678 1187 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 SMTNL1A8MU46 457 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
RC3H1-203ENST00000367696 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
RC3H1-203ENST00000367696 MARCH6O60337 910 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 DDX11Q96FC9 970 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 FANCAO15360 1455 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 ZNF445P59923 1031 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 PIP4K2AP48426 406 aaPredicted RBP9.75□□□□□ -0.85
RC3H1-203ENST00000367696 FILIP1LQ4L180 1135 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 BOLA2Q9H3K6 86 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 DISP1Q96F81 1524 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 TERF1P54274 439 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 RAPGEF6Q8TEU7 1601 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 BTBD11A6QL63 1104 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 SERPINC1P01008 464 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 ESCO1Q5FWF5 840 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 TRIM35Q9UPQ4 493 aa9.75□□□□□ -0.85
RC3H1-203ENST00000367696 FBLN1P23142 703 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 PIK3R4Q99570 1358 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
RC3H1-203ENST00000367696 DACH1Q9UI36 760 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 HMGB1P09429 215 aaKnown RBP9.74□□□□□ -0.85
RC3H1-203ENST00000367696 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.85
RC3H1-203ENST00000367696 UBXN4Q92575 508 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
RC3H1-203ENST00000367696 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.85
RC3H1-203ENST00000367696 ZNF165P49910 485 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
RC3H1-203ENST00000367696 ALDH1L1O75891 902 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 ZSCAN25Q6NSZ9 544 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 DDX54Q8TDD1 881 aaKnown RBP9.73□□□□□ -0.85
RC3H1-203ENST00000367696 GJB2P29033 226 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 HSP90AB2PQ58FF8 381 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 ZGPATQ8N5A5 531 aaKnown RBP9.73□□□□□ -0.85
RC3H1-203ENST00000367696 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
RC3H1-203ENST00000367696 CDKL5O76039 1030 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
RC3H1-203ENST00000367696 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■■■□ 21.6
RC3H1-203ENST00000367696 HMG20BQ9P0W2 317 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 CAMK4Q16566 473 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 CCDC8Q9H0W5 538 aaPredicted RBP9.73□□□□□ -0.85
RC3H1-203ENST00000367696 PTPRTO14522 1441 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 TRIM22Q8IYM9 498 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 EVA1CP58658 441 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
RC3H1-203ENST00000367696 PI4KAP2A4QPH2 592 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 TNNT1P13805 278 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 PI4KAP1Q8N8J0 262 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 NOL7Q9UMY1 257 aaKnown RBP9.72□□□□□ -0.85
RC3H1-203ENST00000367696 CKAP2LQ8IYA6 745 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
RC3H1-203ENST00000367696 SMARCE1Q969G3 411 aa9.72□□□□□ -0.85
RC3H1-203ENST00000367696 DNMT1P26358 1616 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms