RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 NISCHQ9Y2I1 1504 aa14.48□□□□□ -0.09
RC3H1-203ENST00000367696 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
RC3H1-203ENST00000367696 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
RC3H1-203ENST00000367696 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
RC3H1-203ENST00000367696 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
RC3H1-203ENST00000367696 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
RC3H1-203ENST00000367696 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
RC3H1-203ENST00000367696 FAM9AQ8IZU1 332 aaPredicted RBP12.9□□□□□ -0.34
RC3H1-203ENST00000367696 HRCP23327 699 aa12.9□□□□□ -0.35
RC3H1-203ENST00000367696 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
RC3H1-203ENST00000367696 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
RC3H1-203ENST00000367696 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
RC3H1-203ENST00000367696 APLP2Q06481 763 aa12.75□□□□□ -0.37
RC3H1-203ENST00000367696 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
RC3H1-203ENST00000367696 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
RC3H1-203ENST00000367696 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
RC3H1-203ENST00000367696 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
RC3H1-203ENST00000367696 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
RC3H1-203ENST00000367696 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
RC3H1-203ENST00000367696 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
RC3H1-203ENST00000367696 MYT1Q01538 1121 aa12.44□□□□□ -0.42
RC3H1-203ENST00000367696 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
RC3H1-203ENST00000367696 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
RC3H1-203ENST00000367696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
RC3H1-203ENST00000367696 NEFLP07196 543 aa12.18□□□□□ -0.46
RC3H1-203ENST00000367696 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
RC3H1-203ENST00000367696 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
RC3H1-203ENST00000367696 DCAF1Q9Y4B6 1507 aa12.12□□□□□ -0.47
RC3H1-203ENST00000367696 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
RC3H1-203ENST00000367696 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
RC3H1-203ENST00000367696 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
RC3H1-203ENST00000367696 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.48
RC3H1-203ENST00000367696 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
RC3H1-203ENST00000367696 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
RC3H1-203ENST00000367696 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
RC3H1-203ENST00000367696 ITGAEP38570 1179 aa11.98□□□□□ -0.49
RC3H1-203ENST00000367696 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
RC3H1-203ENST00000367696 ABCC9O60706 1549 aa11.84□□□□□ -0.51
RC3H1-203ENST00000367696 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
RC3H1-203ENST00000367696 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
RC3H1-203ENST00000367696 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
RC3H1-203ENST00000367696 CLSPNQ9HAW4 1339 aa11.76□□□□□ -0.53
RC3H1-203ENST00000367696 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
RC3H1-203ENST00000367696 FAM50AQ14320 339 aaKnown RBP11.73□□□□□ -0.53
RC3H1-203ENST00000367696 ANP32CO43423 234 aa11.7□□□□□ -0.54
RC3H1-203ENST00000367696 BCANQ96GW7 911 aa11.65□□□□□ -0.54
RC3H1-203ENST00000367696 POLR3GLQ9BT43 218 aa11.65□□□□□ -0.55
RC3H1-203ENST00000367696 EEA1Q15075 1411 aa11.63□□□□□ -0.55
RC3H1-203ENST00000367696 CCDC180Q9P1Z9 1646 aa11.61□□□□□ -0.55
RC3H1-203ENST00000367696 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
RC3H1-203ENST00000367696 MIER1Q8N108 512 aa11.6□□□□□ -0.55
RC3H1-203ENST00000367696 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
RC3H1-203ENST00000367696 CDK11AQ9UQ88 783 aaPredicted RBP11.58□□□□□ -0.56
RC3H1-203ENST00000367696 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
RC3H1-203ENST00000367696 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
RC3H1-203ENST00000367696 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
RC3H1-203ENST00000367696 CEP162Q5TB80 1403 aa11.54□□□□□ -0.56
RC3H1-203ENST00000367696 CLIP1P30622 1438 aa11.53□□□□□ -0.56
RC3H1-203ENST00000367696 CNGB1Q14028 1251 aaPredicted RBP11.53□□□□□ -0.56
RC3H1-203ENST00000367696 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
RC3H1-203ENST00000367696 FKBP8Q14318 412 aa11.49□□□□□ -0.57
RC3H1-203ENST00000367696 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
RC3H1-203ENST00000367696 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
RC3H1-203ENST00000367696 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
RC3H1-203ENST00000367696 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
RC3H1-203ENST00000367696 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.58
RC3H1-203ENST00000367696 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
RC3H1-203ENST00000367696 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
RC3H1-203ENST00000367696 CECR2Q9BXF3 1484 aa11.37□□□□□ -0.59
RC3H1-203ENST00000367696 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
RC3H1-203ENST00000367696 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
RC3H1-203ENST00000367696 ANP32AP39687 249 aaKnown RBP11.33□□□□□ -0.6
RC3H1-203ENST00000367696 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
RC3H1-203ENST00000367696 NACADO15069 1562 aa11.31□□□□□ -0.6
RC3H1-203ENST00000367696 SOGA1O94964 1423 aa11.3□□□□□ -0.6
RC3H1-203ENST00000367696 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
RC3H1-203ENST00000367696 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
RC3H1-203ENST00000367696 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
RC3H1-203ENST00000367696 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
RC3H1-203ENST00000367696 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
RC3H1-203ENST00000367696 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
RC3H1-203ENST00000367696 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
RC3H1-203ENST00000367696 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
RC3H1-203ENST00000367696 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
RC3H1-203ENST00000367696 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
RC3H1-203ENST00000367696 CHIC2Q9UKJ5 165 aa11.24□□□□□ -0.61
RC3H1-203ENST00000367696 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
RC3H1-203ENST00000367696 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
RC3H1-203ENST00000367696 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
RC3H1-203ENST00000367696 CCNB3Q8WWL7 1395 aa11.22□□□□□ -0.61
RC3H1-203ENST00000367696 MROH2BQ7Z745 1585 aa11.21□□□□□ -0.61
RC3H1-203ENST00000367696 CCER2I3L3R5 266 aa11.21□□□□□ -0.62
RC3H1-203ENST00000367696 SIN3AQ96ST3 1273 aa11.2□□□□□ -0.62
RC3H1-203ENST00000367696 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
RC3H1-203ENST00000367696 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
RC3H1-203ENST00000367696 FBLN2P98095 1184 aa11.17□□□□□ -0.62
RC3H1-203ENST00000367696 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RC3H1-203ENST00000367696 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
RC3H1-203ENST00000367696 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
RC3H1-203ENST00000367696 IRX6P78412 446 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms