RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 NHSQ6T4R5 1651 aa26.46■■□□□ 1.83
CD55-203ENST00000367063 TAF7Q15545 349 aaPredicted RBP26.45■■□□□ 1.82
CD55-203ENST00000367063 LAS1LQ9Y4W2 734 aaKnown RBP26.45■■□□□ 1.82
CD55-203ENST00000367063 ZBED9Q6R2W3 1325 aa26.45■■□□□ 1.82
CD55-203ENST00000367063 SIPA1L3O60292 1781 aaPredicted RBP26.45■■□□□ 1.82
CD55-203ENST00000367063 PIGBQ92521 554 aa26.44■■□□□ 1.82
CD55-203ENST00000367063 TRIM37O94972 964 aa26.43■■□□□ 1.82
CD55-203ENST00000367063 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
CD55-203ENST00000367063 BTBD11A6QL63 1104 aa26.42■■□□□ 1.82
CD55-203ENST00000367063 GOLGA2Q08379 1002 aa26.41■■□□□ 1.82
CD55-203ENST00000367063 BCL11BQ9C0K0 894 aaPredicted RBP26.41■■□□□ 1.82
CD55-203ENST00000367063 MIS18AQ9NYP9 233 aa26.41■■□□□ 1.82
CD55-203ENST00000367063 CFAP44Q96MT7 982 aa26.41■■□□□ 1.82
CD55-203ENST00000367063 IFT57Q9NWB7 429 aa26.41■■□□□ 1.82
CD55-203ENST00000367063 IL16Q14005 1332 aa26.41■■□□□ 1.82
CD55-203ENST00000367063 GNAI1P63096 354 aa26.39■■□□□ 1.82
CD55-203ENST00000367063 TSPYL4Q9UJ04 414 aa26.39■■□□□ 1.82
CD55-203ENST00000367063 SLC39A6Q13433 755 aa26.38■■□□□ 1.81
CD55-203ENST00000367063 BTAF1O14981 1849 aa26.38■■□□□ 1.81
CD55-203ENST00000367063 CHL1O00533 1208 aa26.38■■□□□ 1.81
CD55-203ENST00000367063 ZNF853P0CG23 659 aa26.38■■□□□ 1.81
CD55-203ENST00000367063 SPINK5Q9NQ38 1064 aaPredicted RBP26.38■■□□□ 1.81
CD55-203ENST00000367063 BABAM1Q9NWV8 329 aa26.37■■□□□ 1.81
CD55-203ENST00000367063 ASAP1Q9ULH1 1129 aa26.37■■□□□ 1.81
CD55-203ENST00000367063 CDCA7LQ96GN5 454 aa26.36■■□□□ 1.81
CD55-203ENST00000367063 ATG3Q9NT62 314 aa26.36■■□□□ 1.81
CD55-203ENST00000367063 ZNF790Q6PG37 636 aa26.35■■□□□ 1.81
CD55-203ENST00000367063 TTC5Q8N0Z6 440 aa26.35■■□□□ 1.81
CD55-203ENST00000367063 MBIPQ9NS73 344 aa26.35■■□□□ 1.81
CD55-203ENST00000367063 E9PSI1 815 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 ILDR2Q71H61 639 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 KDM3BQ7LBC6 1761 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 PAPPAQ13219 1627 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 KCNQ3O43525 872 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 TSR2Q969E8 191 aaKnown RBP26.34■■□□□ 1.81
CD55-203ENST00000367063 MYH16Q9H6N6 1097 aa26.34■■□□□ 1.81
CD55-203ENST00000367063 SLFN5Q08AF3 891 aa26.33■■□□□ 1.81
CD55-203ENST00000367063 SMARCC1Q92922 1105 aaPredicted RBP26.31■■□□□ 1.8
CD55-203ENST00000367063 FANCIQ9NVI1 1328 aa26.31■■□□□ 1.8
CD55-203ENST00000367063 TNS1Q9HBL0 1735 aaKnown RBP26.31■■□□□ 1.8
CD55-203ENST00000367063 APBA3O96018 575 aa26.31■■□□□ 1.8
CD55-203ENST00000367063 PALLDQ8WX93 1383 aa26.31■■□□□ 1.8
CD55-203ENST00000367063 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
CD55-203ENST00000367063 SF3B2Q13435 895 aaKnown RBP26.28■■□□□ 1.8
CD55-203ENST00000367063 ZNF496Q96IT1 587 aaPredicted RBP26.28■■□□□ 1.8
CD55-203ENST00000367063 RBM42Q9BTD8 480 aaKnown RBP26.28■■□□□ 1.8
CD55-203ENST00000367063 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
CD55-203ENST00000367063 KCPQ6ZWJ8 1503 aa26.27■■□□□ 1.8
CD55-203ENST00000367063 EIF4A1P60842 406 aaKnown RBP26.27■■□□□ 1.8
CD55-203ENST00000367063 FMNL2Q96PY5 1086 aa26.27■■□□□ 1.8
CD55-203ENST00000367063 TRMT2AQ8IZ69 625 aaKnown RBP26.25■■□□□ 1.79
CD55-203ENST00000367063 DUSP27Q5VZP5 1158 aa26.25■■□□□ 1.79
CD55-203ENST00000367063 LOC102724428A0A0B4J2F2 783 aa26.24■■□□□ 1.79
CD55-203ENST00000367063 SIK1P57059 783 aa26.24■■□□□ 1.79
CD55-203ENST00000367063 KRT24Q2M2I5 525 aa26.24■■□□□ 1.79
CD55-203ENST00000367063 CCDC125Q86Z20 511 aa26.24■■□□□ 1.79
CD55-203ENST00000367063 PLSCR1O15162 318 aa26.23■■□□□ 1.79
CD55-203ENST00000367063 LY75O60449 1722 aa26.22■■□□□ 1.79
CD55-203ENST00000367063 HEG1Q9ULI3 1381 aa26.22■■□□□ 1.79
CD55-203ENST00000367063 EXOSC9Q06265 439 aaKnown RBP26.22■■□□□ 1.79
CD55-203ENST00000367063 ELL2O00472 640 aaPredicted RBP26.21■■□□□ 1.79
CD55-203ENST00000367063 C8orf58Q8NAV2 365 aa26.21■■□□□ 1.79
CD55-203ENST00000367063 ATP6V1AP38606 617 aa26.2■■□□□ 1.78
CD55-203ENST00000367063 UPF1Q92900 1129 aaKnown RBP eCLIP26.2■■□□□ 1.78
CD55-203ENST00000367063 SLC4A9Q96Q91 983 aa26.2■■□□□ 1.78
CD55-203ENST00000367063 CCNL1Q9UK58 526 aaPredicted RBP26.2■■□□□ 1.78
CD55-203ENST00000367063 GIGYF1O75420 1035 aaPredicted RBP26.19■■□□□ 1.78
CD55-203ENST00000367063 SNRPA1P09661 255 aaKnown RBP26.19■■□□□ 1.78
CD55-203ENST00000367063 BAG6P46379 1132 aa26.19■■□□□ 1.78
CD55-203ENST00000367063 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
CD55-203ENST00000367063 PRAMEF22A3QJZ6 481 aa26.19■■□□□ 1.78
CD55-203ENST00000367063 TSPYL6Q8N831 410 aa26.19■■□□□ 1.78
CD55-203ENST00000367063 KCNQ4P56696 695 aa26.18■■□□□ 1.78
CD55-203ENST00000367063 EN1Q05925 392 aaPredicted RBP26.18■■□□□ 1.78
CD55-203ENST00000367063 RGPD3A6NKT7 1758 aaPredicted RBP26.17■■□□□ 1.78
CD55-203ENST00000367063 RGPD4Q7Z3J3 1758 aa26.17■■□□□ 1.78
CD55-203ENST00000367063 TXNRD1Q16881 649 aa26.17■■□□□ 1.78
CD55-203ENST00000367063 TWISTNBQ3B726 338 aaPredicted RBP26.17■■□□□ 1.78
CD55-203ENST00000367063 DEFB132Q7Z7B7 95 aa26.17■■□□□ 1.78
CD55-203ENST00000367063 C5P01031 1676 aa26.17■■□□□ 1.78
CD55-203ENST00000367063 SLC27A3Q5K4L6 730 aa26.16■■□□□ 1.78
CD55-203ENST00000367063 DNAJC10Q8IXB1 793 aa26.16■■□□□ 1.78
CD55-203ENST00000367063 ZNF831Q5JPB2 1677 aa26.15■■□□□ 1.78
CD55-203ENST00000367063 ITPK1Q13572 414 aa26.15■■□□□ 1.78
CD55-203ENST00000367063 EZH2Q15910 746 aaKnown RBP26.15■■□□□ 1.78
CD55-203ENST00000367063 PROM2Q8N271 834 aa26.15■■□□□ 1.78
CD55-203ENST00000367063 TEX13AQ9BXU3 409 aaPredicted RBP26.15■■□□□ 1.78
CD55-203ENST00000367063 TJP1Q07157 1748 aa26.15■■□□□ 1.78
CD55-203ENST00000367063 CAMKK2Q96RR4 588 aa26.14■■□□□ 1.78
CD55-203ENST00000367063 USP16Q9Y5T5 823 aa26.14■■□□□ 1.78
CD55-203ENST00000367063 HOXB7P09629 217 aa26.13■■□□□ 1.77
CD55-203ENST00000367063 LRRC4BQ9NT99 713 aa26.13■■□□□ 1.77
CD55-203ENST00000367063 EIF2S2P20042 333 aaKnown RBP26.12■■□□□ 1.77
CD55-203ENST00000367063 SOS1Q07889 1333 aaPredicted RBP26.12■■□□□ 1.77
CD55-203ENST00000367063 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
CD55-203ENST00000367063 CICQ96RK0 1608 aaPredicted RBP26.12■■□□□ 1.77
CD55-203ENST00000367063 VAMP4O75379 141 aa26.12■■□□□ 1.77
CD55-203ENST00000367063 STARD3NLO95772 234 aa26.11■■□□□ 1.77
CD55-203ENST00000367063 NECTIN2Q92692 538 aa26.11■■□□□ 1.77
CD55-203ENST00000367063 HDGFL1Q5TGJ6 251 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms