RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
MRPL55-216ENST00000366744 RALBP1Q15311 655 aa12.44□□□□□ -0.42
MRPL55-216ENST00000366744 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
MRPL55-216ENST00000366744 TJP1Q07157 1748 aa12.44□□□□□ -0.42
MRPL55-216ENST00000366744 COL24A1Q17RW2 1714 aa12.44□□□□□ -0.42
MRPL55-216ENST00000366744 MSH5O43196 834 aa12.43□□□□□ -0.42
MRPL55-216ENST00000366744 ZBTB7AO95365 584 aa12.43□□□□□ -0.42
MRPL55-216ENST00000366744 KCNQ4P56696 695 aa12.43□□□□□ -0.42
MRPL55-216ENST00000366744 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
MRPL55-216ENST00000366744 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 SIK1P57059 783 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
MRPL55-216ENST00000366744 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
MRPL55-216ENST00000366744 POLD1P28340 1107 aa12.41□□□□□ -0.42
MRPL55-216ENST00000366744 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
MRPL55-216ENST00000366744 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
MRPL55-216ENST00000366744 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
MRPL55-216ENST00000366744 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
MRPL55-216ENST00000366744 PNPLA7Q6ZV29 1317 aa12.4□□□□□ -0.42
MRPL55-216ENST00000366744 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
MRPL55-216ENST00000366744 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
MRPL55-216ENST00000366744 TEFQ10587 303 aa12.4□□□□□ -0.42
MRPL55-216ENST00000366744 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
MRPL55-216ENST00000366744 PNNQ9H307 717 aaKnown RBP12.4□□□□□ -0.42
MRPL55-216ENST00000366744 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 FCHSD2O94868 740 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
MRPL55-216ENST00000366744 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 SLC52A2Q9HAB3 445 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
MRPL55-216ENST00000366744 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-216ENST00000366744 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
MRPL55-216ENST00000366744 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
MRPL55-216ENST00000366744 PHF14O94880 888 aa12.38□□□□□ -0.43
MRPL55-216ENST00000366744 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
MRPL55-216ENST00000366744 PDGFDQ9GZP0 370 aaPredicted RBP12.38□□□□□ -0.43
MRPL55-216ENST00000366744 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
MRPL55-216ENST00000366744 GNPATO15228 680 aa12.37□□□□□ -0.43
MRPL55-216ENST00000366744 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
MRPL55-216ENST00000366744 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
MRPL55-216ENST00000366744 SSFA2P28290 1259 aa12.36□□□□□ -0.43
MRPL55-216ENST00000366744 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
MRPL55-216ENST00000366744 LINC00116Q8NCU8 138 aa12.36□□□□□ -0.43
MRPL55-216ENST00000366744 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
MRPL55-216ENST00000366744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
MRPL55-216ENST00000366744 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
MRPL55-216ENST00000366744 ARXQ96QS3 562 aa12.35□□□□□ -0.43
MRPL55-216ENST00000366744 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
MRPL55-216ENST00000366744 ITPK1Q13572 414 aa12.34□□□□□ -0.43
MRPL55-216ENST00000366744 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
MRPL55-216ENST00000366744 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
MRPL55-216ENST00000366744 CHD4Q14839 1912 aa12.33□□□□□ -0.44
MRPL55-216ENST00000366744 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-216ENST00000366744 ADRA2BP18089 450 aa12.33□□□□□ -0.44
MRPL55-216ENST00000366744 PTGER2P43116 358 aa12.33□□□□□ -0.44
MRPL55-216ENST00000366744 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-216ENST00000366744 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
MRPL55-216ENST00000366744 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
MRPL55-216ENST00000366744 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
MRPL55-216ENST00000366744 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
MRPL55-216ENST00000366744 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
MRPL55-216ENST00000366744 RFC4P35249 363 aa12.31□□□□□ -0.44
MRPL55-216ENST00000366744 TRAPPC3LQ5T215 181 aa12.31□□□□□ -0.44
MRPL55-216ENST00000366744 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
MRPL55-216ENST00000366744 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
MRPL55-216ENST00000366744 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-216ENST00000366744 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-216ENST00000366744 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
MRPL55-216ENST00000366744 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
MRPL55-216ENST00000366744 LMOD3Q0VAK6 560 aa12.3□□□□□ -0.44
MRPL55-216ENST00000366744 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
MRPL55-216ENST00000366744 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
MRPL55-216ENST00000366744 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
MRPL55-216ENST00000366744 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
MRPL55-216ENST00000366744 BCORQ6W2J9 1755 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 STARD3NLO95772 234 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 NFE2L2Q16236 605 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 MCM10Q7L590 875 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 HEG1Q9ULI3 1381 aa12.29□□□□□ -0.44
MRPL55-216ENST00000366744 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
MRPL55-216ENST00000366744 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
MRPL55-216ENST00000366744 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-216ENST00000366744 COL15A1P39059 1388 aa12.28□□□□□ -0.44
MRPL55-216ENST00000366744 ANP32CO43423 234 aa12.27□□□□□ -0.45
MRPL55-216ENST00000366744 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
MRPL55-216ENST00000366744 ZPR1O75312 459 aa12.26□□□□□ -0.45
MRPL55-216ENST00000366744 NLGN1Q8N2Q7 840 aa12.26□□□□□ -0.45
MRPL55-216ENST00000366744 PLEKHF1Q96S99 279 aa12.26□□□□□ -0.45
MRPL55-216ENST00000366744 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
MRPL55-216ENST00000366744 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-216ENST00000366744 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms