RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 PDE4CQ08493 712 aa10.34□□□□□ -0.75
HMGN2-201ENST00000361427 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGN2-201ENST00000361427 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
HMGN2-201ENST00000361427 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
HMGN2-201ENST00000361427 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
HMGN2-201ENST00000361427 ADAMTS13Q76LX8 1427 aa10.33□□□□□ -0.76
HMGN2-201ENST00000361427 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
HMGN2-201ENST00000361427 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
HMGN2-201ENST00000361427 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
HMGN2-201ENST00000361427 SLC26A8Q96RN1 970 aa10.32□□□□□ -0.76
HMGN2-201ENST00000361427 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
HMGN2-201ENST00000361427 LRRC7Q96NW7 1537 aa10.32□□□□□ -0.76
HMGN2-201ENST00000361427 KCNA6P17658 529 aa10.31□□□□□ -0.76
HMGN2-201ENST00000361427 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
HMGN2-201ENST00000361427 IRF5Q13568 498 aa10.31□□□□□ -0.76
HMGN2-201ENST00000361427 NUTM2DQ5VT03 806 aaPredicted RBP10.31□□□□□ -0.76
HMGN2-201ENST00000361427 PROCA1Q8NCQ7 364 aaPredicted RBP10.31□□□□□ -0.76
HMGN2-201ENST00000361427 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
HMGN2-201ENST00000361427 SPATA31E1Q6ZUB1 1445 aa10.31□□□□□ -0.76
HMGN2-201ENST00000361427 KIF1BO60333 1816 aa10.3□□□□□ -0.76
HMGN2-201ENST00000361427 NRXN3Q9Y4C0 1643 aa10.3□□□□□ -0.76
HMGN2-201ENST00000361427 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
HMGN2-201ENST00000361427 NWD1Q149M9 1564 aa10.3□□□□□ -0.76
HMGN2-201ENST00000361427 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
HMGN2-201ENST00000361427 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
HMGN2-201ENST00000361427 DNAJB2P25686 324 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 RBM25P49756 843 aaKnown RBP10.29□□□□□ -0.76
HMGN2-201ENST00000361427 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
HMGN2-201ENST00000361427 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 BEGAINQ9BUH8 593 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 TMEM134Q9H6X4 195 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
HMGN2-201ENST00000361427 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
HMGN2-201ENST00000361427 ADH1BP00325 375 aa10.28□□□□□ -0.76
HMGN2-201ENST00000361427 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
HMGN2-201ENST00000361427 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
HMGN2-201ENST00000361427 CRIPAKQ8N1N5 446 aa10.28□□□□□ -0.76
HMGN2-201ENST00000361427 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
HMGN2-201ENST00000361427 PIK3R4Q99570 1358 aa10.27□□□□□ -0.76
HMGN2-201ENST00000361427 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
HMGN2-201ENST00000361427 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.77
HMGN2-201ENST00000361427 XIRP1Q702N8 1843 aaKnown RBP10.27□□□□□ -0.77
HMGN2-201ENST00000361427 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.77
HMGN2-201ENST00000361427 PTPRUQ92729 1446 aa10.26□□□□□ -0.77
HMGN2-201ENST00000361427 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
HMGN2-201ENST00000361427 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGN2-201ENST00000361427 PPLO60437 1756 aa10.26□□□□□ -0.77
HMGN2-201ENST00000361427 METP08581 1390 aa10.26□□□□□ -0.77
HMGN2-201ENST00000361427 TMEM94Q12767 1356 aa10.26□□□□□ -0.77
HMGN2-201ENST00000361427 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
HMGN2-201ENST00000361427 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
HMGN2-201ENST00000361427 WFS1O76024 890 aa10.24□□□□□ -0.77
HMGN2-201ENST00000361427 AVPP01185 164 aa10.24□□□□□ -0.77
HMGN2-201ENST00000361427 CFHP08603 1231 aa10.24□□□□□ -0.77
HMGN2-201ENST00000361427 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
HMGN2-201ENST00000361427 SETD1AO15047 1707 aaKnown RBP10.24□□□□□ -0.77
HMGN2-201ENST00000361427 TOM1O60784 492 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 NR1I2O75469 434 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 SLC10A3P09131 477 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 FOXC1Q12948 553 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 AMOTL2Q9Y2J4 779 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 IFT172Q9UG01 1749 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 NCOA3Q9Y6Q9 1424 aa10.23□□□□□ -0.77
HMGN2-201ENST00000361427 XRN1Q8IZH2 1706 aaKnown RBP10.22□□□□□ -0.77
HMGN2-201ENST00000361427 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 RFC5P40937 340 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
HMGN2-201ENST00000361427 RGL3Q3MIN7 710 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 MYSM1Q5VVJ2 828 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 SCUBE3Q8IX30 993 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
HMGN2-201ENST00000361427 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
HMGN2-201ENST00000361427 PRAG1Q86YV5 1406 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 NRXN1Q9ULB1 1477 aa10.22□□□□□ -0.77
HMGN2-201ENST00000361427 SOCS7O14512 581 aa10.21□□□□□ -0.77
HMGN2-201ENST00000361427 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
HMGN2-201ENST00000361427 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.77
HMGN2-201ENST00000361427 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
HMGN2-201ENST00000361427 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
HMGN2-201ENST00000361427 GMPR2Q9P2T1 348 aaKnown RBP10.21□□□□□ -0.77
HMGN2-201ENST00000361427 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.78
HMGN2-201ENST00000361427 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
HMGN2-201ENST00000361427 E9PSI1 815 aa10.2□□□□□ -0.78
HMGN2-201ENST00000361427 ZNF428Q96B54 188 aa10.2□□□□□ -0.78
HMGN2-201ENST00000361427 STK17AQ9UEE5 414 aa10.2□□□□□ -0.78
HMGN2-201ENST00000361427 MYOM2P54296 1465 aa10.19□□□□□ -0.78
HMGN2-201ENST00000361427 WIPF1O43516 503 aa10.19□□□□□ -0.78
HMGN2-201ENST00000361427 KCNA1Q09470 495 aa10.19□□□□□ -0.78
HMGN2-201ENST00000361427 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
HMGN2-201ENST00000361427 C11orf95C9JLR9 678 aaPredicted RBP10.18□□□□□ -0.78
HMGN2-201ENST00000361427 IGSF3O75054 1194 aa10.18□□□□□ -0.78
HMGN2-201ENST00000361427 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
HMGN2-201ENST00000361427 GDPD2Q9HCC8 539 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms