RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KCNQ2O43526 872 aa19.93■□□□□ 0.78
TPM1-206ENST00000358278 CALD1Q05682 793 aaKnown RBP19.93■□□□□ 0.78
TPM1-206ENST00000358278 NFATC2IPQ8NCF5 419 aa19.93■□□□□ 0.78
TPM1-206ENST00000358278 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
TPM1-206ENST00000358278 TRIM37O94972 964 aa19.93■□□□□ 0.78
TPM1-206ENST00000358278 UBR2Q8IWV8 1755 aa19.92■□□□□ 0.78
TPM1-206ENST00000358278 PIGBQ92521 554 aa19.9■□□□□ 0.78
TPM1-206ENST00000358278 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
TPM1-206ENST00000358278 TAF7Q15545 349 aaPredicted RBP19.9■□□□□ 0.78
TPM1-206ENST00000358278 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
TPM1-206ENST00000358278 ZBED9Q6R2W3 1325 aa19.89■□□□□ 0.77
TPM1-206ENST00000358278 ZNF521Q96K83 1311 aa19.89■□□□□ 0.77
TPM1-206ENST00000358278 LY75O60449 1722 aa19.89■□□□□ 0.77
TPM1-206ENST00000358278 BTBD11A6QL63 1104 aa19.88■□□□□ 0.77
TPM1-206ENST00000358278 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
TPM1-206ENST00000358278 PTF1AQ7RTS3 328 aa19.88■□□□□ 0.77
TPM1-206ENST00000358278 WDR63Q8IWG1 891 aa19.88■□□□□ 0.77
TPM1-206ENST00000358278 IFT57Q9NWB7 429 aa19.87■□□□□ 0.77
TPM1-206ENST00000358278 TSPYL4Q9UJ04 414 aa19.87■□□□□ 0.77
TPM1-206ENST00000358278 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
TPM1-206ENST00000358278 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
TPM1-206ENST00000358278 IL16Q14005 1332 aa19.86■□□□□ 0.77
TPM1-206ENST00000358278 GNAI1P63096 354 aa19.86■□□□□ 0.77
TPM1-206ENST00000358278 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
TPM1-206ENST00000358278 CFAP44Q96MT7 982 aa19.86■□□□□ 0.77
TPM1-206ENST00000358278 MIS18AQ9NYP9 233 aa19.86■□□□□ 0.77
TPM1-206ENST00000358278 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
TPM1-206ENST00000358278 SLC39A6Q13433 755 aa19.85■□□□□ 0.77
TPM1-206ENST00000358278 ASAP1Q9ULH1 1129 aa19.85■□□□□ 0.77
TPM1-206ENST00000358278 SF3B2Q13435 895 aaKnown RBP19.85■□□□□ 0.77
TPM1-206ENST00000358278 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
TPM1-206ENST00000358278 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
TPM1-206ENST00000358278 PALLDQ8WX93 1383 aa19.83■□□□□ 0.77
TPM1-206ENST00000358278 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.77
TPM1-206ENST00000358278 ATG3Q9NT62 314 aa19.83■□□□□ 0.77
TPM1-206ENST00000358278 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
TPM1-206ENST00000358278 CHL1O00533 1208 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 APBA3O96018 575 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 TAF1LQ8IZX4 1826 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 ZNF853P0CG23 659 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 MBIPQ9NS73 344 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 C5P01031 1676 aa19.82■□□□□ 0.76
TPM1-206ENST00000358278 ZNF831Q5JPB2 1677 aa19.81■□□□□ 0.76
TPM1-206ENST00000358278 LAMB4A4D0S4 1761 aa19.81■□□□□ 0.76
TPM1-206ENST00000358278 E9PSI1 815 aa19.81■□□□□ 0.76
TPM1-206ENST00000358278 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
TPM1-206ENST00000358278 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
TPM1-206ENST00000358278 KCNQ3O43525 872 aa19.8■□□□□ 0.76
TPM1-206ENST00000358278 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
TPM1-206ENST00000358278 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
TPM1-206ENST00000358278 TJP1Q07157 1748 aa19.8■□□□□ 0.76
TPM1-206ENST00000358278 CCDC125Q86Z20 511 aa19.79■□□□□ 0.76
TPM1-206ENST00000358278 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
TPM1-206ENST00000358278 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
TPM1-206ENST00000358278 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
TPM1-206ENST00000358278 CICQ96RK0 1608 aaPredicted RBP19.79■□□□□ 0.76
TPM1-206ENST00000358278 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
TPM1-206ENST00000358278 BAG6P46379 1132 aa19.78■□□□□ 0.76
TPM1-206ENST00000358278 ZNF496Q96IT1 587 aaPredicted RBP19.78■□□□□ 0.76
TPM1-206ENST00000358278 COL5A3P25940 1745 aaPredicted RBP19.78■□□□□ 0.76
TPM1-206ENST00000358278 SLFN5Q08AF3 891 aa19.77■□□□□ 0.76
TPM1-206ENST00000358278 RREB1Q92766 1687 aa19.77■□□□□ 0.76
TPM1-206ENST00000358278 LOC102724428A0A0B4J2F2 783 aa19.76■□□□□ 0.75
TPM1-206ENST00000358278 PLSCR1O15162 318 aa19.76■□□□□ 0.75
TPM1-206ENST00000358278 SIK1P57059 783 aa19.76■□□□□ 0.75
TPM1-206ENST00000358278 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
TPM1-206ENST00000358278 HEG1Q9ULI3 1381 aa19.76■□□□□ 0.75
TPM1-206ENST00000358278 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
TPM1-206ENST00000358278 ATP6V1AP38606 617 aa19.74■□□□□ 0.75
TPM1-206ENST00000358278 CCNL1Q9UK58 526 aaPredicted RBP19.74■□□□□ 0.75
TPM1-206ENST00000358278 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
TPM1-206ENST00000358278 NUP188Q5SRE5 1749 aa19.73■□□□□ 0.75
TPM1-206ENST00000358278 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
TPM1-206ENST00000358278 DEFB132Q7Z7B7 95 aa19.73■□□□□ 0.75
TPM1-206ENST00000358278 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
TPM1-206ENST00000358278 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
TPM1-206ENST00000358278 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
TPM1-206ENST00000358278 SNRPA1P09661 255 aaKnown RBP19.72■□□□□ 0.75
TPM1-206ENST00000358278 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
TPM1-206ENST00000358278 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
TPM1-206ENST00000358278 DUSP27Q5VZP5 1158 aa19.72■□□□□ 0.75
TPM1-206ENST00000358278 KCNQ4P56696 695 aa19.71■□□□□ 0.75
TPM1-206ENST00000358278 EXOSC9Q06265 439 aaKnown RBP19.71■□□□□ 0.75
TPM1-206ENST00000358278 SLC4A9Q96Q91 983 aa19.71■□□□□ 0.75
TPM1-206ENST00000358278 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
TPM1-206ENST00000358278 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
TPM1-206ENST00000358278 EZH2Q15910 746 aaKnown RBP19.71■□□□□ 0.75
TPM1-206ENST00000358278 TRMT2AQ8IZ69 625 aaKnown RBP19.71■□□□□ 0.75
TPM1-206ENST00000358278 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
TPM1-206ENST00000358278 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
TPM1-206ENST00000358278 CAMKK2Q96RR4 588 aa19.7■□□□□ 0.74
TPM1-206ENST00000358278 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
TPM1-206ENST00000358278 DNAJC10Q8IXB1 793 aa19.69■□□□□ 0.74
TPM1-206ENST00000358278 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
TPM1-206ENST00000358278 ITPK1Q13572 414 aa19.68■□□□□ 0.74
TPM1-206ENST00000358278 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
TPM1-206ENST00000358278 LRRC4BQ9NT99 713 aa19.68■□□□□ 0.74
TPM1-206ENST00000358278 HOXB7P09629 217 aa19.68■□□□□ 0.74
TPM1-206ENST00000358278 PROM2Q8N271 834 aa19.68■□□□□ 0.74
TPM1-206ENST00000358278 TSPYL6Q8N831 410 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms