RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 FIBPO43427 364 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 SULT6B1Q6IMI4 303 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 BBXQ8WY36 941 aaPredicted RBP9.26□□□□□ -0.93
CD46-204ENST00000357714 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 CNPY2Q9Y2B0 182 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 ABCC3O15438 1527 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 CHMLP26374 656 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 DMTNQ08495 405 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 AEBP1Q8IUX7 1158 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 SRCIN1Q9C0H9 1055 aa9.26□□□□□ -0.93
CD46-204ENST00000357714 LETM1O95202 739 aaPredicted RBP9.25□□□□□ -0.93
CD46-204ENST00000357714 GNAI2P04899 355 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 PDE4CQ08493 712 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 KIDINS220Q9ULH0 1771 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 YEATS2Q9ULM3 1422 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 ZSCAN20P17040 1043 aaPredicted RBP9.25□□□□□ -0.93
CD46-204ENST00000357714 MIS18AQ9NYP9 233 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 NEXMIFQ5QGS0 1516 aa9.25□□□□□ -0.93
CD46-204ENST00000357714 CHL1O00533 1208 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 KDM4AO75164 1064 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 FKBP5Q13451 457 aaPredicted RBP9.24□□□□□ -0.93
CD46-204ENST00000357714 PDCL2Q8N4E4 241 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 PTPRMP28827 1452 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 KNDC1Q76NI1 1749 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 CCT4P50991 539 aaKnown RBP9.24□□□□□ -0.93
CD46-204ENST00000357714 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
CD46-204ENST00000357714 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
CD46-204ENST00000357714 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 POGZQ7Z3K3 1410 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
CD46-204ENST00000357714 GTF2F1P35269 517 aaKnown RBP eCLIP9.24□□□□□ -0.93
CD46-204ENST00000357714 UBE2HP62256 183 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 G2E3Q7L622 706 aa9.24□□□□□ -0.93
CD46-204ENST00000357714 RGS12O14924 1447 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 IGSF3O75054 1194 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 ATP2B3Q16720 1220 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 ASXL2Q76L83 1435 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 ARHGEF40Q8TER5 1519 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
CD46-204ENST00000357714 SMC3Q9UQE7 1217 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 ATP6V1DQ9Y5K8 247 aa9.23□□□□□ -0.93
CD46-204ENST00000357714 GOLGA6L6A8MZA4 724 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 STX6O43752 255 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 IL1RAPL2Q9NP60 686 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 SPTLC3Q9NUV7 552 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 CPSF1Q10570 1443 aaKnown RBP9.22□□□□□ -0.93
CD46-204ENST00000357714 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
CD46-204ENST00000357714 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
CD46-204ENST00000357714 SYT1P21579 422 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
CD46-204ENST00000357714 GTPBP4Q9BZE4 634 aaKnown RBP9.22□□□□□ -0.93
CD46-204ENST00000357714 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.22□□□□□ -0.93
CD46-204ENST00000357714 KIAA0232Q92628 1395 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 PNMA6EA0A0J9YXQ4 647 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 SOX12O15370 315 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 GNAI3P08754 354 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.93
CD46-204ENST00000357714 PYCARDQ9ULZ3 195 aa9.21□□□□□ -0.93
CD46-204ENST00000357714 DTNBO60941 627 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 F13A1P00488 732 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 TPM3P06753 285 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 HSPA4P34932 840 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 ANKRD26Q9UPS8 1709 aa9.21□□□□□ -0.94
CD46-204ENST00000357714 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
CD46-204ENST00000357714 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
CD46-204ENST00000357714 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.945e-9■■■□□ 14.8
CD46-204ENST00000357714 AK2P54819 239 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 IL25Q9H293 177 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 LIMCH1Q9UPQ0 1083 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 HECW2Q9P2P5 1572 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 SALL3Q9BXA9 1300 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
CD46-204ENST00000357714 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
CD46-204ENST00000357714 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
CD46-204ENST00000357714 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
CD46-204ENST00000357714 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
CD46-204ENST00000357714 EDC4Q6P2E9 1401 aaKnown RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms