RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 STAC3Q96MF2 364 aa7.58□□□□□ -1.2
CD47-201ENST00000355354 NSFL1CQ9UNZ2 370 aaKnown RBP7.58□□□□□ -1.2
CD47-201ENST00000355354 PLEKHG2Q9H7P9 1386 aa7.58□□□□□ -1.2
CD47-201ENST00000355354 BARGINQ6ZT62 677 aa7.57□□□□□ -1.2
CD47-201ENST00000355354 TSC1Q92574 1164 aa7.57□□□□□ -1.2
CD47-201ENST00000355354 KIF2CQ99661 725 aa7.57□□□□□ -1.2
CD47-201ENST00000355354 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
CD47-201ENST00000355354 KIAA0232Q92628 1395 aa7.57□□□□□ -1.2
CD47-201ENST00000355354 N4BP2Q86UW6 1770 aaPredicted RBP7.57□□□□□ -1.2
CD47-201ENST00000355354 RCAN3Q9UKA8 241 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 MYT1LQ9UL68 1186 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 TIAM2Q8IVF5 1701 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 PLEKHG5O94827 1062 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 FER1L6Q2WGJ9 1857 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 PPP2R1AP30153 589 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
CD47-201ENST00000355354 LARP6Q9BRS8 491 aaKnown RBP7.55□□□□□ -1.2
CD47-201ENST00000355354 ANTXR1Q9H6X2 564 aa7.55□□□□□ -1.2
CD47-201ENST00000355354 QTRT2Q9H974 415 aaKnown RBP7.55□□□□□ -1.2
CD47-201ENST00000355354 TRPC5Q9UL62 973 aaPredicted RBP7.55□□□□□ -1.2
CD47-201ENST00000355354 KDM3BQ7LBC6 1761 aa7.55□□□□□ -1.2
CD47-201ENST00000355354 KAT6BQ8WYB5 2073 aa7.55□□□□□ -1.2
CD47-201ENST00000355354 MIS18AQ9NYP9 233 aa7.55□□□□□ -1.2
CD47-201ENST00000355354 CRB1P82279 1406 aa7.55□□□□□ -1.2
CD47-201ENST00000355354 FOXD4L1Q9NU39 408 aa7.54□□□□□ -1.2
CD47-201ENST00000355354 ADCY9O60503 1353 aa7.54□□□□□ -1.2
CD47-201ENST00000355354 EIF3AQ14152 1382 aaKnown RBP7.54□□□□□ -1.2
CD47-201ENST00000355354 GZF1Q9H116 711 aaPredicted RBP7.54□□□□□ -1.2
CD47-201ENST00000355354 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
CD47-201ENST00000355354 A0A1B0GUL6 1792 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 GGNBP2Q9H3C7 697 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 ATF3P18847 181 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 LTBP1Q14766 1721 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 PROM2Q8N271 834 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
CD47-201ENST00000355354 KNL1Q8NG31 2342 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 LAMB2P55268 1798 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 ZBTB7CA1YPR0 619 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 SLC51AQ86UW1 340 aa7.53□□□□□ -1.2
CD47-201ENST00000355354 CABP2Q9NPB3 220 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 CCDC88AQ3V6T2 1871 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 WDR90Q96KV7 1748 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 PPIP5K1Q6PFW1 1433 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
CD47-201ENST00000355354 FOXO3O43524 673 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 ZBTB9Q96C00 473 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 FAM177BA6PVY3 158 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 MYT1Q01538 1121 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 AEBP1Q8IUX7 1158 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 USP21Q9UK80 565 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.21
CD47-201ENST00000355354 TRMT2AQ8IZ69 625 aaKnown RBP7.51□□□□□ -1.21
CD47-201ENST00000355354 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
CD47-201ENST00000355354 KTN1Q86UP2 1357 aaKnown RBP7.51□□□□□ -1.21
CD47-201ENST00000355354 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
CD47-201ENST00000355354 NKX2-3Q8TAU0 364 aa7.51□□□□□ -1.21
CD47-201ENST00000355354 INSRP06213 1382 aa7.51□□□□□ -1.21
CD47-201ENST00000355354 NEFMP07197 916 aa7.51□□□□□ -1.21
CD47-201ENST00000355354 COL3A1P02461 1466 aaPredicted RBP7.5□□□□□ -1.21
CD47-201ENST00000355354 SLFNL1Q499Z3 407 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 PTGER2P43116 358 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 STK26Q9P289 416 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 TRIM35Q9UPQ4 493 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 PSME4Q14997 1843 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 MTHFSP49914 203 aa7.5□□□□□ -1.21
CD47-201ENST00000355354 LRRC37AA6NMS7 1700 aa7.49□□□□□ -1.21
CD47-201ENST00000355354 MEGF6O75095 1541 aa7.49□□□□□ -1.21
CD47-201ENST00000355354 TACC2O95359 2948 aa7.49□□□□□ -1.21
CD47-201ENST00000355354 SOX12O15370 315 aa7.49□□□□□ -1.21
CD47-201ENST00000355354 OVOS2A0A0G2JMS6 1433 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 PUS7Q96PZ0 661 aaKnown RBP7.48□□□□□ -1.21
CD47-201ENST00000355354 ROCK2O75116 1388 aaKnown RBP7.48□□□□□ -1.21
CD47-201ENST00000355354 CACNA1SQ13698 1873 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 PRAM1Q96QH2 718 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 PHF8Q9UPP1 1060 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 ANKRD36CQ5JPF3 1778 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 A0A087WWV3 80 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
CD47-201ENST00000355354 WWC1Q8IX03 1113 aa7.48□□□□□ -1.21
CD47-201ENST00000355354 PPFIA3O75145 1194 aa7.47□□□□□ -1.21
CD47-201ENST00000355354 DDX54Q8TDD1 881 aaKnown RBP7.47□□□□□ -1.21
CD47-201ENST00000355354 KCPQ6ZWJ8 1503 aa7.47□□□□□ -1.21
CD47-201ENST00000355354 KRT28Q7Z3Y7 464 aa7.47□□□□□ -1.21
CD47-201ENST00000355354 PAPPA2Q9BXP8 1791 aa7.47□□□□□ -1.21
CD47-201ENST00000355354 HMOX1P09601 288 aa7.46□□□□□ -1.21
CD47-201ENST00000355354 C8orf37Q96NL8 207 aa7.46□□□□□ -1.21
CD47-201ENST00000355354 EDC4Q6P2E9 1401 aaKnown RBP7.46□□□□□ -1.21
CD47-201ENST00000355354 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.21
CD47-201ENST00000355354 KALRNO60229 2985 aa7.46□□□□□ -1.21
CD47-201ENST00000355354 SLFN5Q08AF3 891 aa7.46□□□□□ -1.22
CD47-201ENST00000355354 TCP11L2Q8N4U5 519 aa7.46□□□□□ -1.22
CD47-201ENST00000355354 BCL11BQ9C0K0 894 aaPredicted RBP7.46□□□□□ -1.22
CD47-201ENST00000355354 TBC1D2Q9BYX2 928 aa7.46□□□□□ -1.22
CD47-201ENST00000355354 THRAP3Q9Y2W1 955 aaKnown RBP7.46□□□□□ -1.22
CD47-201ENST00000355354 KDRP35968 1356 aa7.46□□□□□ -1.22
CD47-201ENST00000355354 ANXA1P04083 346 aa7.45□□□□□ -1.22
CD47-201ENST00000355354 PTF1AQ7RTS3 328 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms