RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 REC8O95072 547 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 KCNA6P17658 529 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 HOXC9P31274 260 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 ERC2O15083 957 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 LRRFIP2Q9Y608 721 aaKnown RBP24.03■■□□□ 1.44
COL13A1-201ENST00000354547 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
COL13A1-201ENST00000354547 ST18O60284 1047 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 CHAMP1Q96JM3 812 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 SKOR2Q2VWA4 1001 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-201ENST00000354547 LRRCC1Q9C099 1032 aa24.01■■□□□ 1.43
COL13A1-201ENST00000354547 RGPD8O14715 1765 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-201ENST00000354547 KIF13AQ9H1H9 1805 aa24.01■■□□□ 1.43
COL13A1-201ENST00000354547 IL1RAPL2Q9NP60 686 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
COL13A1-201ENST00000354547 TOPAZ1Q8N9V7 1692 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 KDRP35968 1356 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 NEK4P51957 841 aa23.99■■□□□ 1.43
COL13A1-201ENST00000354547 RGPD1P0DJD0 1748 aa23.99■■□□□ 1.43
COL13A1-201ENST00000354547 GNAI3P08754 354 aa23.98■■□□□ 1.43
COL13A1-201ENST00000354547 MX1P20591 662 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 HDGFL1Q5TGJ6 251 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 ANO2Q9NQ90 1003 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 MAP4K4O95819 1239 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
COL13A1-201ENST00000354547 SETD1BQ9UPS6 1966 aaKnown RBP23.96■■□□□ 1.43
COL13A1-201ENST00000354547 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
COL13A1-201ENST00000354547 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
COL13A1-201ENST00000354547 ANXA1P04083 346 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 UBTFL1P0CB47 393 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-201ENST00000354547 NUCB2P80303 420 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 DIP2AQ14689 1571 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 CAVIN1Q6NZI2 390 aaKnown RBP23.94■■□□□ 1.42
COL13A1-201ENST00000354547 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 OSBPL3Q9H4L5 887 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 MAP3K5Q99683 1374 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 PRPF40AO75400 957 aaKnown RBP23.92■■□□□ 1.42
COL13A1-201ENST00000354547 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 LGR6Q9HBX8 967 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 PTMSP20962 102 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 TRIM44Q96DX7 344 aaPredicted RBP23.92■■□□□ 1.42
COL13A1-201ENST00000354547 FMN2Q9NZ56 1722 aa23.91■■□□□ 1.42
COL13A1-201ENST00000354547 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 FOXD4L6Q3SYB3 417 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 FOXD4L3Q6VB84 417 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 SURF6O75683 361 aaKnown RBP23.9■■□□□ 1.42
COL13A1-201ENST00000354547 UPF3BQ9BZI7 483 aaKnown RBP23.9■■□□□ 1.42
COL13A1-201ENST00000354547 KCNQ3O43525 872 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 KLHL40Q2TBA0 621 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 PIK3C2AO00443 1686 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 CHMLP26374 656 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 TMX3Q96JJ7 454 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 ZDHHC9Q9Y397 364 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF6Q5VWK0 638 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF4Q96M43 638 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LMBRD1Q9NUN5 540 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 CWC22Q9HCG8 908 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 RBM27Q9P2N5 1060 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 ISY1Q9ULR0 285 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 SALL3Q9BXA9 1300 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 CYP2E1P05181 493 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 IL25Q9H293 177 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF7P0C2Y1 421 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 CLEC17AQ6ZS10 378 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 ERBB4Q15303 1308 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 SRGAP3O43295 1099 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 MCCP23508 829 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NASPP49321 788 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NAP1L5Q96NT1 182 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 SRCIN1Q9C0H9 1055 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
COL13A1-201ENST00000354547 PI4KAP2A4QPH2 592 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 PSME1Q06323 249 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 PI4KAP1Q8N8J0 262 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 ESPNB1AK53 854 aa23.83■■□□□ 1.41
COL13A1-201ENST00000354547 ZSCAN23Q3MJ62 389 aa23.82■■□□□ 1.4
COL13A1-201ENST00000354547 TEFQ10587 303 aa23.82■■□□□ 1.4
COL13A1-201ENST00000354547 LARP6Q9BRS8 491 aaKnown RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 SOS1Q07889 1333 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 OS9Q13438 667 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 EIF4A1P60842 406 aaKnown RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 GPT2Q8TD30 523 aa23.81■■□□□ 1.4
COL13A1-201ENST00000354547 ARHGAP23Q9P227 1491 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 CLCN1P35523 988 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 NSFL1CQ9UNZ2 370 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 535.4 ms