RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ZKSCAN8Q15776 578 aaPredicted RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 EFCAB13Q8IY85 973 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 ZNF830Q96NB3 372 aaPredicted RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 SCAPERQ9BY12 1400 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 GIGYF2Q6Y7W6 1299 aaKnown RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 GOLGA1Q92805 767 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 SPATA32Q96LK8 384 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 NCOA1Q15788 1441 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 INPP5BP32019 993 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 MSL1Q68DK7 614 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 SPATS2Q86XZ4 545 aaKnown RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 ZBTB12Q9Y330 459 aaPredicted RBP5.87□□□□□ -1.47
SKP1-202ENST00000353411 ABCA10Q8WWZ4 1543 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 ELP1O95163 1332 aa5.87□□□□□ -1.47
SKP1-202ENST00000353411 SPECC1LQ69YQ0 1117 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 CPLX2Q6PUV4 134 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 ZSCAN31Q96LW9 406 aaPredicted RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 FMNL2Q96PY5 1086 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 PLB1Q6P1J6 1458 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 GCKP35557 465 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 TERF2Q15554 542 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 CCDC181Q5TID7 509 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 CLASRPQ8N2M8 674 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 NUCKS1Q9H1E3 243 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 VEZTQ9HBM0 779 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 RAD50Q92878 1312 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 SKILP12757 684 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 SH2D4BQ5SQS7 431 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 HCLS1P14317 486 aaPredicted RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 CCDC38Q502W7 563 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 PRDM4Q9UKN5 801 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 SLC20A2Q08357 652 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 LUC7LQ9NQ29 371 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 TRMT1Q9NXH9 659 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 KIF3CO14782 793 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 OPA1O60313 960 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 SPATA24Q86W54 205 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 RBM27Q9P2N5 1060 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 SATB1Q01826 763 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 BMP2KLQ5H9B9 411 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 CCDC121Q6ZUS5 278 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 ZNHIT6Q9NWK9 470 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 PPP6R1Q9UPN7 881 aa5.86□□□□□ -1.47
SKP1-202ENST00000353411 SPAG9O60271 1321 aaKnown RBP5.86□□□□□ -1.47
SKP1-202ENST00000353411 BCAR3O75815 825 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 MCM6Q14566 821 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 SEPT14Q6ZU15 432 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 NEDD9Q14511 834 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 ANKS4BQ8N8V4 417 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 PCMTD1Q96MG8 357 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 RRP15Q9Y3B9 282 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 LRRC9Q6ZRR7 1453 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 CCDC175P0C221 793 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 IBSPP21815 317 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 SLFN5Q08AF3 891 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 PPP2R5AQ15172 486 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 STX1AQ16623 288 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 MCTP2Q6DN12 878 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 RBSNQ9H1K0 784 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 SENP3Q9H4L4 574 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 TDRD9Q8NDG6 1382 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 TRIM29Q14134 588 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 CCDC47Q96A33 483 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 ANKRD18BA2A2Z9 1011 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 ZSCAN20P17040 1043 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 NAP1L1P55209 391 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 PIP4K2BP78356 416 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 FKBP5Q13451 457 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 KIF4BQ2VIQ3 1234 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 DMRT2Q9Y5R5 561 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 ZNF165P49910 485 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 RIPK4P57078 832 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 MAP2K1Q02750 393 aaPredicted RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 CCDC186Q7Z3E2 898 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 RASSF8Q8NHQ8 419 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 TCHPQ9BT92 498 aa5.85□□□□□ -1.47
SKP1-202ENST00000353411 RRP7AQ9Y3A4 280 aaKnown RBP5.85□□□□□ -1.47
SKP1-202ENST00000353411 NUP155O75694 1391 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 LOC102724159A0A0B4J2E5 919 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 SLC8A1P32418 973 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 MAGEA9P43362 315 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 PWP2Q15269 919 aaKnown RBP5.84□□□□□ -1.47
SKP1-202ENST00000353411 LARP1BQ659C4 914 aaKnown RBP5.84□□□□□ -1.47
SKP1-202ENST00000353411 CCDC114Q96M63 670 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 SCLT1Q96NL6 688 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 SNAPC4Q5SXM2 1469 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 TOP2BQ02880 1626 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 FAM177BA6PVY3 158 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 TXLNAP40222 546 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 FOSBP53539 338 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 FAM76AQ8TAV0 307 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 FGD6Q6ZV73 1430 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 KIF3BO15066 747 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 TUBB2AQ13885 445 aa5.84□□□□□ -1.47
SKP1-202ENST00000353411 AFAP1L1Q8TED9 768 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms