RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 ATP2B2Q01814 1243 aa17.33■□□□□ 0.37
SMARCA2-203ENST00000349721 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.37
SMARCA2-203ENST00000349721 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.37
SMARCA2-203ENST00000349721 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 DDX23Q9BUQ8 820 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 FERP16591 822 aa17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 CEP135Q66GS9 1140 aa17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 EHBP1Q8NDI1 1231 aa17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.36
SMARCA2-203ENST00000349721 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 KIF20AO95235 890 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 V9GYY5 206 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 CCDC171Q6TFL3 1326 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 MAP4K4O95819 1239 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 BCAR3O75815 825 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 TRMT1Q9NXH9 659 aaKnown RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 CCDC6Q16204 474 aa17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 CTNNBL1Q8WYA6 563 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-203ENST00000349721 ZNF76P36508 570 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 SEPT6Q14141 434 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 AACSQ86V21 672 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 CAVIN2O95810 425 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 RPAP2Q8IXW5 612 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 GTPBP4Q9BZE4 634 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-203ENST00000349721 STX1AQ16623 288 aa17.3■□□□□ 0.36
SMARCA2-203ENST00000349721 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-203ENST00000349721 MSL1Q68DK7 614 aa17.3■□□□□ 0.36
SMARCA2-203ENST00000349721 TDO2P48775 406 aa17.3■□□□□ 0.36
SMARCA2-203ENST00000349721 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
SMARCA2-203ENST00000349721 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
SMARCA2-203ENST00000349721 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
SMARCA2-203ENST00000349721 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
SMARCA2-203ENST00000349721 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
SMARCA2-203ENST00000349721 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 ADCY5O95622 1261 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 KLHL10Q6JEL2 608 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 TMC6Q7Z403 805 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
SMARCA2-203ENST00000349721 MPHOSPH10O00566 681 aaKnown RBP17.27■□□□□ 0.36
SMARCA2-203ENST00000349721 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.36
SMARCA2-203ENST00000349721 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMARCA2-203ENST00000349721 IFI16Q16666 785 aaKnown RBP17.27■□□□□ 0.36
SMARCA2-203ENST00000349721 SIL1Q9H173 461 aa17.27■□□□□ 0.36
SMARCA2-203ENST00000349721 OPA1O60313 960 aa17.27■□□□□ 0.35
SMARCA2-203ENST00000349721 CTNNA2P26232 953 aa17.27■□□□□ 0.35
SMARCA2-203ENST00000349721 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.35
SMARCA2-203ENST00000349721 RSPH14Q9UHP6 348 aa17.27■□□□□ 0.35
SMARCA2-203ENST00000349721 TNIP1Q15025 636 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 TUBB4AP04350 444 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 SREK1Q8WXA9 508 aaKnown RBP17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 FAM114A1Q8IWE2 563 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 ANKS4BQ8N8V4 417 aa17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 TTC31Q49AM3 519 aaPredicted RBP17.26■□□□□ 0.35
SMARCA2-203ENST00000349721 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 TMCO5BA8MYB1 307 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 FKBP4Q02790 459 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 FERMT3Q86UX7 667 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 DNA2P51530 1060 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 NAP1L3Q99457 506 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 CEP83Q9Y592 693 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 CLGNO14967 610 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
SMARCA2-203ENST00000349721 PYM1Q9BRP8 204 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 IKBKGQ9Y6K9 419 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 CCDC160A6NGH7 325 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 PPP1R14CQ8TAE6 165 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 C8orf76Q96K31 380 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 GOLIM4O00461 696 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 NOL3O60936 208 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 GNG11P61952 73 aa17.24■□□□□ 0.35
SMARCA2-203ENST00000349721 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
SMARCA2-203ENST00000349721 CETN1Q12798 172 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms