RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
SNCG-201ENST00000348795 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
SNCG-201ENST00000348795 SPATA31A5Q5VU36 1347 aa23.55■■□□□ 1.36
SNCG-201ENST00000348795 SPATA31A7Q8IWB4 1347 aa23.55■■□□□ 1.36
SNCG-201ENST00000348795 MRC1P22897 1456 aa23.54■■□□□ 1.36
SNCG-201ENST00000348795 SIPA1L3O60292 1781 aaPredicted RBP23.53■■□□□ 1.36
SNCG-201ENST00000348795 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
SNCG-201ENST00000348795 VPS72Q15906 364 aa23.53■■□□□ 1.36
SNCG-201ENST00000348795 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
SNCG-201ENST00000348795 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
SNCG-201ENST00000348795 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
SNCG-201ENST00000348795 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
SNCG-201ENST00000348795 CCDC30Q5VVM6 783 aa23.52■■□□□ 1.36
SNCG-201ENST00000348795 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
SNCG-201ENST00000348795 C8orf37Q96NL8 207 aa23.52■■□□□ 1.36
SNCG-201ENST00000348795 CHMP4BQ9H444 224 aaKnown RBP23.52■■□□□ 1.36
SNCG-201ENST00000348795 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
SNCG-201ENST00000348795 CABP4P57796 275 aa23.51■■□□□ 1.35
SNCG-201ENST00000348795 IRX6P78412 446 aaPredicted RBP23.51■■□□□ 1.35
SNCG-201ENST00000348795 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
SNCG-201ENST00000348795 STK31Q9BXU1 1019 aa23.51■■□□□ 1.35
SNCG-201ENST00000348795 PLIN1O60240 522 aa23.5■■□□□ 1.35
SNCG-201ENST00000348795 MIS18AQ9NYP9 233 aa23.5■■□□□ 1.35
SNCG-201ENST00000348795 EIF4A1P60842 406 aaKnown RBP23.49■■□□□ 1.35
SNCG-201ENST00000348795 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
SNCG-201ENST00000348795 MRPL50Q8N5N7 158 aaKnown RBP23.49■■□□□ 1.35
SNCG-201ENST00000348795 API5Q9BZZ5 524 aaKnown RBP23.49■■□□□ 1.35
SNCG-201ENST00000348795 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
SNCG-201ENST00000348795 CACNA1FO60840 1977 aa23.49■■□□□ 1.35
SNCG-201ENST00000348795 ELL2O00472 640 aaPredicted RBP23.48■■□□□ 1.35
SNCG-201ENST00000348795 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
SNCG-201ENST00000348795 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
SNCG-201ENST00000348795 DDX54Q8TDD1 881 aaKnown RBP23.48■■□□□ 1.35
SNCG-201ENST00000348795 PTPRCP08575 1304 aa23.48■■□□□ 1.35
SNCG-201ENST00000348795 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
SNCG-201ENST00000348795 DDB1Q16531 1140 aa23.47■■□□□ 1.35
SNCG-201ENST00000348795 DZIP1LQ8IYY4 767 aaKnown RBP23.47■■□□□ 1.35
SNCG-201ENST00000348795 USP21Q9UK80 565 aa23.47■■□□□ 1.35
SNCG-201ENST00000348795 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
SNCG-201ENST00000348795 LRP6O75581 1613 aa23.47■■□□□ 1.35
SNCG-201ENST00000348795 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
SNCG-201ENST00000348795 NFATC2IPQ8NCF5 419 aa23.46■■□□□ 1.35
SNCG-201ENST00000348795 BCL2L13Q9BXK5 485 aa23.46■■□□□ 1.35
SNCG-201ENST00000348795 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
SNCG-201ENST00000348795 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
SNCG-201ENST00000348795 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
SNCG-201ENST00000348795 HEG1Q9ULI3 1381 aa23.44■■□□□ 1.34
SNCG-201ENST00000348795 CRBNQ96SW2 442 aa23.43■■□□□ 1.34
SNCG-201ENST00000348795 EXOC6Q8TAG9 804 aa23.42■■□□□ 1.34
SNCG-201ENST00000348795 FMNL2Q96PY5 1086 aa23.42■■□□□ 1.34
SNCG-201ENST00000348795 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
SNCG-201ENST00000348795 CCDC136Q96JN2 1154 aa23.41■■□□□ 1.34
SNCG-201ENST00000348795 TMOD3Q9NYL9 352 aa23.41■■□□□ 1.34
SNCG-201ENST00000348795 DDX19BQ9UMR2 479 aa23.41■■□□□ 1.34
SNCG-201ENST00000348795 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
SNCG-201ENST00000348795 TRIM27P14373 513 aa23.4■■□□□ 1.34
SNCG-201ENST00000348795 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
SNCG-201ENST00000348795 GIGYF1O75420 1035 aaPredicted RBP23.39■■□□□ 1.33
SNCG-201ENST00000348795 MVPQ14764 893 aaKnown RBP23.39■■□□□ 1.33
SNCG-201ENST00000348795 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
SNCG-201ENST00000348795 C20orf194Q5TEA3 1177 aa23.39■■□□□ 1.33
SNCG-201ENST00000348795 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
SNCG-201ENST00000348795 DBF4Q9UBU7 674 aaPredicted RBP23.37■■□□□ 1.33
SNCG-201ENST00000348795 AFF2P51816 1311 aa23.36■■□□□ 1.33
SNCG-201ENST00000348795 PANK1Q8TE04 598 aa23.36■■□□□ 1.33
SNCG-201ENST00000348795 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
SNCG-201ENST00000348795 GJD4Q96KN9 370 aaPredicted RBP23.35■■□□□ 1.33
SNCG-201ENST00000348795 ERBB4Q15303 1308 aa23.34■■□□□ 1.33
SNCG-201ENST00000348795 KCNQ3O43525 872 aa23.34■■□□□ 1.33
SNCG-201ENST00000348795 COG6Q9Y2V7 657 aa23.34■■□□□ 1.33
SNCG-201ENST00000348795 ABCC4O15439 1325 aa23.33■■□□□ 1.33
SNCG-201ENST00000348795 ATRNO75882 1429 aa23.33■■□□□ 1.33
SNCG-201ENST00000348795 VSIG10Q8N0Z9 540 aa23.33■■□□□ 1.33
SNCG-201ENST00000348795 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
SNCG-201ENST00000348795 HYPKQ9NX55 129 aa23.33■■□□□ 1.33
SNCG-201ENST00000348795 PAPPAQ13219 1627 aa23.33■■□□□ 1.32
SNCG-201ENST00000348795 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
SNCG-201ENST00000348795 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
SNCG-201ENST00000348795 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
SNCG-201ENST00000348795 SLC39A6Q13433 755 aa23.31■■□□□ 1.32
SNCG-201ENST00000348795 ZNF496Q96IT1 587 aaPredicted RBP23.31■■□□□ 1.32
SNCG-201ENST00000348795 UBR2Q8IWV8 1755 aa23.31■■□□□ 1.32
SNCG-201ENST00000348795 CCT4P50991 539 aaKnown RBP23.3■■□□□ 1.32
SNCG-201ENST00000348795 FLIIQ13045 1269 aa23.3■■□□□ 1.32
SNCG-201ENST00000348795 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
SNCG-201ENST00000348795 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
SNCG-201ENST00000348795 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNCG-201ENST00000348795 BCL9O00512 1426 aa23.3■■□□□ 1.32
SNCG-201ENST00000348795 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
SNCG-201ENST00000348795 RLBP1P12271 317 aa23.29■■□□□ 1.32
SNCG-201ENST00000348795 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
SNCG-201ENST00000348795 TOGARAM1Q9Y4F4 1720 aa23.29■■□□□ 1.32
SNCG-201ENST00000348795 ITGB4P16144 1822 aa23.29■■□□□ 1.32
SNCG-201ENST00000348795 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
SNCG-201ENST00000348795 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
SNCG-201ENST00000348795 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
SNCG-201ENST00000348795 PXDNLA1KZ92 1463 aa23.28■■□□□ 1.32
SNCG-201ENST00000348795 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.32
SNCG-201ENST00000348795 FKBP5Q13451 457 aaPredicted RBP23.27■■□□□ 1.32
SNCG-201ENST00000348795 MARCH10Q8NA82 808 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms