RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 IQSEC2Q5JU85 1478 aa19.47■□□□□ 0.71
MBD1-204ENST00000347968 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
MBD1-204ENST00000347968 ANKRD36BQ8N2N9 1353 aa19.47■□□□□ 0.71
MBD1-204ENST00000347968 POLR3GO15318 223 aaPredicted RBP19.46■□□□□ 0.71
MBD1-204ENST00000347968 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
MBD1-204ENST00000347968 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
MBD1-204ENST00000347968 TRIM66O15016 1216 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
MBD1-204ENST00000347968 CAMSAP1Q5T5Y3 1602 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 LUZP1Q86V48 1076 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
MBD1-204ENST00000347968 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
MBD1-204ENST00000347968 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 LOC102724159A0A0B4J2E5 919 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 MX1P20591 662 aa19.45■□□□□ 0.7
MBD1-204ENST00000347968 PWP2Q15269 919 aaKnown RBP19.45■□□□□ 0.7
MBD1-204ENST00000347968 C10orf67Q8IYJ2 551 aa19.44■□□□□ 0.7
MBD1-204ENST00000347968 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
MBD1-204ENST00000347968 TCHHQ07283 1943 aa19.44■□□□□ 0.7
MBD1-204ENST00000347968 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
MBD1-204ENST00000347968 CFAP53Q96M91 514 aa19.44■□□□□ 0.7
MBD1-204ENST00000347968 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
MBD1-204ENST00000347968 USP27XA6NNY8 438 aa19.43■□□□□ 0.7
MBD1-204ENST00000347968 CAMK4Q16566 473 aa19.43■□□□□ 0.7
MBD1-204ENST00000347968 LAMC1P11047 1609 aa19.43■□□□□ 0.7
MBD1-204ENST00000347968 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
MBD1-204ENST00000347968 ZNF397Q8NF99 534 aaPredicted RBP19.43■□□□□ 0.7
MBD1-204ENST00000347968 ZNF446Q9NWS9 450 aa19.43■□□□□ 0.7
MBD1-204ENST00000347968 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
MBD1-204ENST00000347968 TRMT1Q9NXH9 659 aaKnown RBP19.42■□□□□ 0.7
MBD1-204ENST00000347968 ADGRB3O60242 1522 aa19.42■□□□□ 0.7
MBD1-204ENST00000347968 GOLGA6L6A8MZA4 724 aa19.41■□□□□ 0.7
MBD1-204ENST00000347968 PRR29P0C7W0 189 aa19.41■□□□□ 0.7
MBD1-204ENST00000347968 ARID5BQ14865 1188 aa19.41■□□□□ 0.7
MBD1-204ENST00000347968 LCMT1Q9UIC8 334 aa19.41■□□□□ 0.7
MBD1-204ENST00000347968 SOX12O15370 315 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
MBD1-204ENST00000347968 MYOM1P52179 1685 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 TSPYL6Q8N831 410 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 CEP135Q66GS9 1140 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
MBD1-204ENST00000347968 CYP2C19P33261 490 aa19.39■□□□□ 0.69
MBD1-204ENST00000347968 SYT10Q6XYQ8 523 aa19.39■□□□□ 0.69
MBD1-204ENST00000347968 CASC1Q6TDU7 716 aa19.39■□□□□ 0.69
MBD1-204ENST00000347968 NFATC2IPQ8NCF5 419 aa19.39■□□□□ 0.69
MBD1-204ENST00000347968 MYOM2P54296 1465 aa19.39■□□□□ 0.69
MBD1-204ENST00000347968 EP400NLQ6ZTU2 488 aa19.38■□□□□ 0.69
MBD1-204ENST00000347968 CKAP2LQ8IYA6 745 aa19.38■□□□□ 0.69
MBD1-204ENST00000347968 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
MBD1-204ENST00000347968 LRRN4CLQ8ND94 238 aa19.38■□□□□ 0.69
MBD1-204ENST00000347968 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
MBD1-204ENST00000347968 STK26Q9P289 416 aa19.38■□□□□ 0.69
MBD1-204ENST00000347968 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
MBD1-204ENST00000347968 REC8O95072 547 aa19.37■□□□□ 0.69
MBD1-204ENST00000347968 ZSCAN25Q6NSZ9 544 aa19.37■□□□□ 0.69
MBD1-204ENST00000347968 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
MBD1-204ENST00000347968 CACTINQ8WUQ7 758 aaKnown RBP19.37■□□□□ 0.69
MBD1-204ENST00000347968 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
MBD1-204ENST00000347968 ERC2O15083 957 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 CT47B1P0C2W7 299 aaPredicted RBP19.36■□□□□ 0.69
MBD1-204ENST00000347968 KIF13AQ9H1H9 1805 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 FUCA2Q9BTY2 467 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 ST5P78524 1137 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 KRBA2Q6ZNG9 492 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 ZCCHC17Q9NP64 241 aaKnown RBP19.36■□□□□ 0.69
MBD1-204ENST00000347968 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 EXOC6BQ9Y2D4 811 aa19.36■□□□□ 0.69
MBD1-204ENST00000347968 CHRM1P11229 460 aaPredicted RBP19.35■□□□□ 0.69
MBD1-204ENST00000347968 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
MBD1-204ENST00000347968 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
MBD1-204ENST00000347968 ERCC6LQ2NKX8 1250 aa19.35■□□□□ 0.69
MBD1-204ENST00000347968 CCDC144BQ3MJ40 725 aa19.35■□□□□ 0.69
MBD1-204ENST00000347968 CCDC144CPQ8IYA2 1237 aa19.35■□□□□ 0.69
MBD1-204ENST00000347968 SYCP1Q15431 976 aa19.34■□□□□ 0.69
MBD1-204ENST00000347968 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.34■□□□□ 0.69
MBD1-204ENST00000347968 GTF2A1P52655 376 aaPredicted RBP19.33■□□□□ 0.69
MBD1-204ENST00000347968 WDR33Q9C0J8 1336 aaKnown RBP19.33■□□□□ 0.69
MBD1-204ENST00000347968 DNM1Q05193 864 aaKnown RBP19.33■□□□□ 0.69
MBD1-204ENST00000347968 KRT24Q2M2I5 525 aa19.33■□□□□ 0.69
MBD1-204ENST00000347968 RASSF4Q9H2L5 321 aa19.33■□□□□ 0.69
MBD1-204ENST00000347968 PAXBP1Q9Y5B6 917 aa19.33■□□□□ 0.69
MBD1-204ENST00000347968 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
MBD1-204ENST00000347968 ERVK-7P63135 1459 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 UBE2HP62256 183 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 CUL4AQ13619 759 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 TPM3P06753 285 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 GPATCH11Q8N954 259 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 HDAC5Q9UQL6 1122 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 ERBB3P21860 1342 aa19.32■□□□□ 0.68
MBD1-204ENST00000347968 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
MBD1-204ENST00000347968 ABCC11Q96J66 1382 aa19.31■□□□□ 0.68
MBD1-204ENST00000347968 PPLO60437 1756 aa19.31■□□□□ 0.68
MBD1-204ENST00000347968 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
MBD1-204ENST00000347968 NEURL4Q96JN8 1562 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 APPP05067 770 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms