RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 STRN4Q9NRL3 753 aa8.44□□□□□ -1.06
KNL1-201ENST00000346991 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
KNL1-201ENST00000346991 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
KNL1-201ENST00000346991 OTUD6BQ8N6M0 293 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 HAUS2Q9NVX0 235 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 PAFAH1B1P43034 410 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 PYM1Q9BRP8 204 aaKnown RBP8.43□□□□□ -1.06
KNL1-201ENST00000346991 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
KNL1-201ENST00000346991 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 CEBPZQ03701 1054 aaKnown RBP8.43□□□□□ -1.06
KNL1-201ENST00000346991 PPP4R3BQ5MIZ7 849 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 SMC1BQ8NDV3 1235 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 TAF12Q16514 161 aa8.43□□□□□ -1.06
KNL1-201ENST00000346991 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 GOLGA6L9A6NEM1 432 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 MYO1BO43795 1136 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 CCT4P50991 539 aaKnown RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 HNRNPMP52272 730 aaKnown RBP eCLIP8.42□□□□□ -1.06
KNL1-201ENST00000346991 CCDC89Q8N998 374 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 UPF3BQ9BZI7 483 aaKnown RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 SEPT10Q9P0V9 454 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 CCDC174Q6PII3 467 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 CLIP2Q9UDT6 1046 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.42□□□□□ -1.064e-7■■■□□ 17.1
KNL1-201ENST00000346991 PSMC4P43686 418 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 AMPD3Q01432 767 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 DNAAF4Q8WXU2 420 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 CASQ1P31415 396 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 TPD52P55327 224 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 TBC1D5Q92609 795 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 TMCO5BA8MYB1 307 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 FIBPO43427 364 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 TRAF1Q13077 416 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 STMN4Q9H169 189 aaPredicted RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 STARD3NLO95772 234 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 SPECC1Q5M775 1068 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
KNL1-201ENST00000346991 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
KNL1-201ENST00000346991 NSRP1Q9H0G5 558 aaKnown RBP8.42□□□□□ -1.06
KNL1-201ENST00000346991 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
KNL1-201ENST00000346991 UQCRHP07919 91 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 CASTP20810 708 aaKnown RBP8.41□□□□□ -1.06
KNL1-201ENST00000346991 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 MKNK2Q9HBH9 465 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 ZBED9Q6R2W3 1325 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 A0A1W2PRG0 241 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 VTI1AQ96AJ9 217 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 BIRC2Q13490 618 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 WDR63Q8IWG1 891 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 SYCP3Q8IZU3 236 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 CCDC96Q2M329 555 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 MSANTD4Q8NCY6 345 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 DYNC1I1O14576 645 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 PRPHP41219 470 aa8.41□□□□□ -1.06
KNL1-201ENST00000346991 FKBP4Q02790 459 aaKnown RBP eCLIP8.41□□□□□ -1.06
KNL1-201ENST00000346991 RPGRQ92834 1020 aaKnown RBP8.41□□□□□ -1.06
KNL1-201ENST00000346991 FYCO1Q9BQS8 1478 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 CFAP58Q5T655 872 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 CCDC155Q8N6L0 562 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 LNPKQ9C0E8 428 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 RASAL2Q9UJF2 1139 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 U3KPZ7 1027 aaPredicted RBP8.4□□□□□ -1.06
KNL1-201ENST00000346991 VPS8Q8N3P4 1428 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 SATB1Q01826 763 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 DHX37Q8IY37 1157 aaKnown RBP8.4□□□□□ -1.06
KNL1-201ENST00000346991 GABPB2Q8TAK5 448 aaPredicted RBP8.4□□□□□ -1.06
KNL1-201ENST00000346991 UBXN4Q92575 508 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
KNL1-201ENST00000346991 KIF3CO14782 793 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 NEK4P51957 841 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 SOGA1O94964 1423 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 NLRP6P59044 892 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 CCDC110Q8TBZ0 833 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 SMC6Q96SB8 1091 aa8.4□□□□□ -1.06
KNL1-201ENST00000346991 FBF1Q8TES7 1133 aa8.4□□□□□ -1.07
KNL1-201ENST00000346991 SWAP70Q9UH65 585 aa8.4□□□□□ -1.07
KNL1-201ENST00000346991 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.07
KNL1-201ENST00000346991 BICD1Q96G01 975 aa8.4□□□□□ -1.07
KNL1-201ENST00000346991 CUX1P39880 1505 aa8.4□□□□□ -1.07
KNL1-201ENST00000346991 ATP2A1O14983 1001 aa8.39□□□□□ -1.07
KNL1-201ENST00000346991 CALML4Q96GE6 196 aa8.39□□□□□ -1.07
KNL1-201ENST00000346991 PUF60Q9UHX1 559 aaKnown RBP8.39□□□□□ -1.07
KNL1-201ENST00000346991 USP47Q96K76 1375 aa8.39□□□□□ -1.07
KNL1-201ENST00000346991 CKAP4Q07065 602 aaKnown RBP8.39□□□□□ -1.07
KNL1-201ENST00000346991 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
KNL1-201ENST00000346991 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
KNL1-201ENST00000346991 PPP6R1Q9UPN7 881 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 520.5 ms