RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 PKP1Q13835 747 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 WWC1Q8IX03 1113 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 RUNDC1Q96C34 613 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 NRXN3Q9Y4C0 1643 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 ANKRD7Q92527 254 aa10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 TTC12Q9H892 705 aaPredicted RBP10.96□□□□□ -0.66
AC008543.1-201ENST00000344893 CCDC66A2RUB6 948 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 ADAMTS2O95450 1211 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 GABPB1Q06547 395 aaPredicted RBP10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 SLC20A2Q08357 652 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 MCM10Q7L590 875 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 EIF4A2Q14240 407 aaKnown RBP10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 TIGD1Q96MW7 591 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
AC008543.1-201ENST00000344893 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 SLFN14P0C7P3 912 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 TEX2Q8IWB9 1127 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 NSFL1CQ9UNZ2 370 aaKnown RBP10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 CPS1P31327 1500 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 LAMC1P11047 1609 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 RIOK3O14730 519 aaKnown RBP10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 MSH6P52701 1360 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 ADAMTSL3P82987 1691 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 SLAIN2Q9P270 581 aa10.94□□□□□ -0.66
AC008543.1-201ENST00000344893 ATP7BP35670 1465 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 CHAMP1Q96JM3 812 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 DIAPH3Q9NSV4 1193 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 CYP2E1P05181 493 aaPredicted RBP10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 CHAF1AQ13111 956 aaPredicted RBP10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 CCDC9Q9Y3X0 531 aaKnown RBP10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 SLIT1O75093 1534 aa10.93□□□□□ -0.66
AC008543.1-201ENST00000344893 GCP02774 474 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 LNPKQ9C0E8 428 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 TMPOP42166 694 aaKnown RBP10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 TSPY26PQ9H489 355 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 SPTLC3Q9NUV7 552 aa10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
AC008543.1-201ENST00000344893 CAPN2P17655 700 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 MYOM1P52179 1685 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 NEURL4Q96JN8 1562 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 USP6P35125 1406 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 PRDM11Q9NQV5 511 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 KRT24Q2M2I5 525 aa10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
AC008543.1-201ENST00000344893 ERICH4A6NGS2 130 aa10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 TERF2Q15554 542 aa10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 PUS7Q96PZ0 661 aaKnown RBP10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 EYA1Q99502 592 aa10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 USP25Q9UHP3 1055 aa10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
AC008543.1-201ENST00000344893 UBAP1LF5GYI3 381 aa10.9□□□□□ -0.67
AC008543.1-201ENST00000344893 CTIFO43310 598 aaKnown RBP10.9□□□□□ -0.67
AC008543.1-201ENST00000344893 LMTK3Q96Q04 1460 aa10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 ZKSCAN2Q63HK3 967 aa10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 BRINP3Q76B58 766 aa10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 RTF1Q92541 710 aaKnown RBP10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 TBC1D9Q6ZT07 1266 aa10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
AC008543.1-201ENST00000344893 TULP2O00295 520 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 EVA1CP58658 441 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 NCBP1Q09161 790 aaKnown RBP10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 ZBTB9Q96C00 473 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 DIP2AQ14689 1571 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 MBD3O95983 291 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 IL13P35225 146 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 CALCOCO1Q9P1Z2 691 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 MED14O60244 1454 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 TECPR2O15040 1411 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 ADCY5O95622 1261 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 HOXC9P31274 260 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 NUCB1Q02818 461 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 ZGPATQ8N5A5 531 aaKnown RBP10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 ZDHHC9Q9Y397 364 aa10.88□□□□□ -0.67
AC008543.1-201ENST00000344893 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
AC008543.1-201ENST00000344893 ADGRL3Q9HAR2 1447 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms