RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ITGB4P16144 1822 aa23.32■■□□□ 1.32
SDCBP2-201ENST00000339987 FAM196AQ6ZSG2 479 aa23.32■■□□□ 1.32
SDCBP2-201ENST00000339987 E9PSI1 815 aa23.31■■□□□ 1.32
SDCBP2-201ENST00000339987 CHL1O00533 1208 aa23.31■■□□□ 1.32
SDCBP2-201ENST00000339987 NFATC2IPQ8NCF5 419 aa23.31■■□□□ 1.32
SDCBP2-201ENST00000339987 NHSQ6T4R5 1651 aa23.3■■□□□ 1.32
SDCBP2-201ENST00000339987 SLFN5Q08AF3 891 aa23.3■■□□□ 1.32
SDCBP2-201ENST00000339987 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
SDCBP2-201ENST00000339987 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
SDCBP2-201ENST00000339987 TMOD3Q9NYL9 352 aa23.3■■□□□ 1.32
SDCBP2-201ENST00000339987 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
SDCBP2-201ENST00000339987 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
SDCBP2-201ENST00000339987 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
SDCBP2-201ENST00000339987 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
SDCBP2-201ENST00000339987 TRMT2AQ8IZ69 625 aaKnown RBP23.28■■□□□ 1.32
SDCBP2-201ENST00000339987 BTBD11A6QL63 1104 aa23.27■■□□□ 1.32
SDCBP2-201ENST00000339987 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
SDCBP2-201ENST00000339987 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
SDCBP2-201ENST00000339987 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
SDCBP2-201ENST00000339987 PIGBQ92521 554 aa23.26■■□□□ 1.31
SDCBP2-201ENST00000339987 TSPYL4Q9UJ04 414 aa23.26■■□□□ 1.31
SDCBP2-201ENST00000339987 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
SDCBP2-201ENST00000339987 MBIPQ9NS73 344 aa23.25■■□□□ 1.31
SDCBP2-201ENST00000339987 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
SDCBP2-201ENST00000339987 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
SDCBP2-201ENST00000339987 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
SDCBP2-201ENST00000339987 KCNQ2O43526 872 aa23.24■■□□□ 1.31
SDCBP2-201ENST00000339987 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
SDCBP2-201ENST00000339987 MIS18AQ9NYP9 233 aa23.24■■□□□ 1.31
SDCBP2-201ENST00000339987 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
SDCBP2-201ENST00000339987 ZNF790Q6PG37 636 aa23.22■■□□□ 1.31
SDCBP2-201ENST00000339987 BCL11BQ9C0K0 894 aaPredicted RBP23.22■■□□□ 1.31
SDCBP2-201ENST00000339987 UBR2Q8IWV8 1755 aa23.2■■□□□ 1.3
SDCBP2-201ENST00000339987 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
SDCBP2-201ENST00000339987 BTAF1O14981 1849 aa23.2■■□□□ 1.3
SDCBP2-201ENST00000339987 KCNQ3O43525 872 aa23.19■■□□□ 1.3
SDCBP2-201ENST00000339987 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
SDCBP2-201ENST00000339987 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
SDCBP2-201ENST00000339987 EIF4A1P60842 406 aaKnown RBP23.18■■□□□ 1.3
SDCBP2-201ENST00000339987 ASAP1Q9ULH1 1129 aa23.18■■□□□ 1.3
SDCBP2-201ENST00000339987 KCPQ6ZWJ8 1503 aa23.18■■□□□ 1.3
SDCBP2-201ENST00000339987 PTF1AQ7RTS3 328 aa23.17■■□□□ 1.3
SDCBP2-201ENST00000339987 SMARCC1Q92922 1105 aaPredicted RBP23.17■■□□□ 1.3
SDCBP2-201ENST00000339987 HEG1Q9ULI3 1381 aa23.16■■□□□ 1.3
SDCBP2-201ENST00000339987 TRIM37O94972 964 aa23.16■■□□□ 1.3
SDCBP2-201ENST00000339987 EXOSC9Q06265 439 aaKnown RBP23.15■■□□□ 1.3
SDCBP2-201ENST00000339987 FMNL2Q96PY5 1086 aa23.15■■□□□ 1.3
SDCBP2-201ENST00000339987 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
SDCBP2-201ENST00000339987 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
SDCBP2-201ENST00000339987 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
SDCBP2-201ENST00000339987 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
SDCBP2-201ENST00000339987 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
SDCBP2-201ENST00000339987 HOXB7P09629 217 aa23.12■■□□□ 1.29
SDCBP2-201ENST00000339987 CT47B1P0C2W7 299 aaPredicted RBP23.12■■□□□ 1.29
SDCBP2-201ENST00000339987 VSIG10Q8N0Z9 540 aa23.12■■□□□ 1.29
SDCBP2-201ENST00000339987 KRT24Q2M2I5 525 aa23.11■■□□□ 1.29
SDCBP2-201ENST00000339987 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
SDCBP2-201ENST00000339987 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
SDCBP2-201ENST00000339987 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
SDCBP2-201ENST00000339987 GIGYF1O75420 1035 aaPredicted RBP23.1■■□□□ 1.29
SDCBP2-201ENST00000339987 TWISTNBQ3B726 338 aaPredicted RBP23.1■■□□□ 1.29
SDCBP2-201ENST00000339987 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
SDCBP2-201ENST00000339987 LY75O60449 1722 aa23.09■■□□□ 1.29
SDCBP2-201ENST00000339987 SNRPA1P09661 255 aaKnown RBP23.09■■□□□ 1.29
SDCBP2-201ENST00000339987 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
SDCBP2-201ENST00000339987 LOC102724428A0A0B4J2F2 783 aa23.08■■□□□ 1.28
SDCBP2-201ENST00000339987 VAMP4O75379 141 aa23.08■■□□□ 1.28
SDCBP2-201ENST00000339987 SIK1P57059 783 aa23.08■■□□□ 1.28
SDCBP2-201ENST00000339987 ZNF428Q96B54 188 aa23.08■■□□□ 1.28
SDCBP2-201ENST00000339987 C5P01031 1676 aa23.07■■□□□ 1.28
SDCBP2-201ENST00000339987 LAMB4A4D0S4 1761 aa23.07■■□□□ 1.28
SDCBP2-201ENST00000339987 SLC4A9Q96Q91 983 aa23.07■■□□□ 1.28
SDCBP2-201ENST00000339987 RGPD3A6NKT7 1758 aaPredicted RBP23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 RGPD4Q7Z3J3 1758 aa23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 ELL2O00472 640 aaPredicted RBP23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 PLSCR1O15162 318 aa23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 TEX13AQ9BXU3 409 aaPredicted RBP23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 CHMP4AQ9BY43 222 aa23.06■■□□□ 1.28
SDCBP2-201ENST00000339987 TJP1Q07157 1748 aa23.05■■□□□ 1.28
SDCBP2-201ENST00000339987 APBA3O96018 575 aa23.05■■□□□ 1.28
SDCBP2-201ENST00000339987 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
SDCBP2-201ENST00000339987 CENPBP07199 599 aaPredicted RBP23.03■■□□□ 1.28
SDCBP2-201ENST00000339987 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
SDCBP2-201ENST00000339987 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
SDCBP2-201ENST00000339987 SLC27A3Q5K4L6 730 aa23.01■■□□□ 1.27
SDCBP2-201ENST00000339987 HDGFL1Q5TGJ6 251 aa23.01■■□□□ 1.27
SDCBP2-201ENST00000339987 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
SDCBP2-201ENST00000339987 USP16Q9Y5T5 823 aa23.01■■□□□ 1.27
SDCBP2-201ENST00000339987 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
SDCBP2-201ENST00000339987 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
SDCBP2-201ENST00000339987 ERBB4Q15303 1308 aa23■■□□□ 1.27
SDCBP2-201ENST00000339987 EP400Q96L91 3159 aa23■■□□□ 1.27
SDCBP2-201ENST00000339987 ITPK1Q13572 414 aa22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 ALDH1L2Q3SY69 923 aa22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 CCDC30Q5VVM6 783 aa22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 STARD3NLO95772 234 aa22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
SDCBP2-201ENST00000339987 RARSP54136 660 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms