RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
SRSF3-201ENST00000339436 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
SRSF3-201ENST00000339436 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
SRSF3-201ENST00000339436 PROM2Q8N271 834 aa17.01■□□□□ 0.31
SRSF3-201ENST00000339436 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
SRSF3-201ENST00000339436 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
SRSF3-201ENST00000339436 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
SRSF3-201ENST00000339436 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 TJP1Q07157 1748 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 IL17REQ8NFR9 667 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 SMARCC1Q92922 1105 aaPredicted RBP17■□□□□ 0.31
SRSF3-201ENST00000339436 RUNDC1Q96C34 613 aa17■□□□□ 0.31
SRSF3-201ENST00000339436 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
SRSF3-201ENST00000339436 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
SRSF3-201ENST00000339436 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
SRSF3-201ENST00000339436 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
SRSF3-201ENST00000339436 C4BP0C0L5 1744 aa16.99■□□□□ 0.31
SRSF3-201ENST00000339436 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
SRSF3-201ENST00000339436 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
SRSF3-201ENST00000339436 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
SRSF3-201ENST00000339436 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
SRSF3-201ENST00000339436 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
SRSF3-201ENST00000339436 TEFQ10587 303 aa16.96■□□□□ 0.31
SRSF3-201ENST00000339436 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SRSF3-201ENST00000339436 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
SRSF3-201ENST00000339436 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
SRSF3-201ENST00000339436 DCTN1Q14203 1278 aa16.96■□□□□ 0.3
SRSF3-201ENST00000339436 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.3
SRSF3-201ENST00000339436 CASZ1Q86V15 1759 aa16.95■□□□□ 0.3
SRSF3-201ENST00000339436 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
SRSF3-201ENST00000339436 SIK1P57059 783 aa16.95■□□□□ 0.3
SRSF3-201ENST00000339436 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
SRSF3-201ENST00000339436 KCNQ4P56696 695 aa16.94■□□□□ 0.3
SRSF3-201ENST00000339436 RIPK4P57078 832 aa16.94■□□□□ 0.3
SRSF3-201ENST00000339436 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
SRSF3-201ENST00000339436 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
SRSF3-201ENST00000339436 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
SRSF3-201ENST00000339436 APAF1O14727 1248 aa16.92■□□□□ 0.3
SRSF3-201ENST00000339436 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
SRSF3-201ENST00000339436 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
SRSF3-201ENST00000339436 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
SRSF3-201ENST00000339436 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
SRSF3-201ENST00000339436 SLC4A9Q96Q91 983 aa16.91■□□□□ 0.3
SRSF3-201ENST00000339436 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
SRSF3-201ENST00000339436 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
SRSF3-201ENST00000339436 ITPK1Q13572 414 aa16.9■□□□□ 0.3
SRSF3-201ENST00000339436 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
SRSF3-201ENST00000339436 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
SRSF3-201ENST00000339436 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
SRSF3-201ENST00000339436 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
SRSF3-201ENST00000339436 STK32BQ9NY57 414 aa16.9■□□□□ 0.3
SRSF3-201ENST00000339436 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
SRSF3-201ENST00000339436 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
SRSF3-201ENST00000339436 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
SRSF3-201ENST00000339436 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
SRSF3-201ENST00000339436 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
SRSF3-201ENST00000339436 MIER1Q8N108 512 aa16.89■□□□□ 0.29
SRSF3-201ENST00000339436 AKT1S1Q96B36 256 aa16.89■□□□□ 0.29
SRSF3-201ENST00000339436 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
SRSF3-201ENST00000339436 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
SRSF3-201ENST00000339436 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
SRSF3-201ENST00000339436 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
SRSF3-201ENST00000339436 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
SRSF3-201ENST00000339436 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
SRSF3-201ENST00000339436 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
SRSF3-201ENST00000339436 KCNQ3O43525 872 aa16.86■□□□□ 0.29
SRSF3-201ENST00000339436 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
SRSF3-201ENST00000339436 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
SRSF3-201ENST00000339436 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
SRSF3-201ENST00000339436 LRP5O75197 1615 aa16.85■□□□□ 0.29
SRSF3-201ENST00000339436 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
SRSF3-201ENST00000339436 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
SRSF3-201ENST00000339436 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
SRSF3-201ENST00000339436 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
SRSF3-201ENST00000339436 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
SRSF3-201ENST00000339436 AK7Q96M32 723 aa16.83■□□□□ 0.28
SRSF3-201ENST00000339436 TFCP2L1Q9NZI6 479 aa16.83■□□□□ 0.28
SRSF3-201ENST00000339436 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
SRSF3-201ENST00000339436 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
SRSF3-201ENST00000339436 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
SRSF3-201ENST00000339436 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
SRSF3-201ENST00000339436 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
SRSF3-201ENST00000339436 GNPATO15228 680 aa16.8■□□□□ 0.28
SRSF3-201ENST00000339436 CRKLP46109 303 aaKnown RBP16.8■□□□□ 0.28
SRSF3-201ENST00000339436 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
SRSF3-201ENST00000339436 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
SRSF3-201ENST00000339436 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
SRSF3-201ENST00000339436 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
SRSF3-201ENST00000339436 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
SRSF3-201ENST00000339436 CHL1O00533 1208 aa16.79■□□□□ 0.28
SRSF3-201ENST00000339436 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
SRSF3-201ENST00000339436 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
SRSF3-201ENST00000339436 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
SRSF3-201ENST00000339436 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
SRSF3-201ENST00000339436 SSFA2P28290 1259 aa16.78■□□□□ 0.28
SRSF3-201ENST00000339436 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
SRSF3-201ENST00000339436 TEX13AQ9BXU3 409 aaPredicted RBP16.78■□□□□ 0.28
SRSF3-201ENST00000339436 CCDC87Q9NVE4 849 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms