RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GNAI1P63096 354 aa28.03■■■□□ 2.08
TPM1-204ENST00000334895 CHL1O00533 1208 aa28.02■■■□□ 2.08
TPM1-204ENST00000334895 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
TPM1-204ENST00000334895 KRT27Q7Z3Y8 459 aa28.02■■■□□ 2.08
TPM1-204ENST00000334895 MYH16Q9H6N6 1097 aa28.01■■■□□ 2.07
TPM1-204ENST00000334895 MBIPQ9NS73 344 aa28.01■■■□□ 2.07
TPM1-204ENST00000334895 MIS18AQ9NYP9 233 aa28■■■□□ 2.07
TPM1-204ENST00000334895 TEFQ10587 303 aa28■■■□□ 2.07
TPM1-204ENST00000334895 TAF7Q15545 349 aaPredicted RBP28■■■□□ 2.07
TPM1-204ENST00000334895 SLC52A2Q9HAB3 445 aa28■■■□□ 2.07
TPM1-204ENST00000334895 KDM3BQ7LBC6 1761 aa27.99■■■□□ 2.07
TPM1-204ENST00000334895 DOT1LQ8TEK3 1739 aa27.99■■■□□ 2.07
TPM1-204ENST00000334895 FAM182BQ5T319 152 aa27.98■■■□□ 2.07
TPM1-204ENST00000334895 ITGB4P16144 1822 aa27.97■■■□□ 2.07
TPM1-204ENST00000334895 ERVV-2B6SEH9 535 aa27.96■■■□□ 2.07
TPM1-204ENST00000334895 NFATC2IPQ8NCF5 419 aa27.96■■■□□ 2.07
TPM1-204ENST00000334895 TSPYL4Q9UJ04 414 aa27.96■■■□□ 2.07
TPM1-204ENST00000334895 BABAM1Q9NWV8 329 aa27.95■■■□□ 2.06
TPM1-204ENST00000334895 SBF2Q86WG5 1849 aa27.95■■■□□ 2.06
TPM1-204ENST00000334895 KAT6BQ8WYB5 2073 aa27.94■■■□□ 2.06
TPM1-204ENST00000334895 CABP4P57796 275 aa27.94■■■□□ 2.06
TPM1-204ENST00000334895 EXOSC9Q06265 439 aaKnown RBP27.92■■■□□ 2.06
TPM1-204ENST00000334895 BTBD11A6QL63 1104 aa27.92■■■□□ 2.06
TPM1-204ENST00000334895 PAPPAQ13219 1627 aa27.91■■■□□ 2.06
TPM1-204ENST00000334895 KCNQ3O43525 872 aa27.91■■■□□ 2.06
TPM1-204ENST00000334895 KRT24Q2M2I5 525 aa27.89■■■□□ 2.05
TPM1-204ENST00000334895 BCL9O00512 1426 aa27.88■■■□□ 2.05
TPM1-204ENST00000334895 C8orf58Q8NAV2 365 aa27.88■■■□□ 2.05
TPM1-204ENST00000334895 PRIM1P49642 420 aaKnown RBP27.87■■■□□ 2.05
TPM1-204ENST00000334895 SLC39A6Q13433 755 aa27.87■■■□□ 2.05
TPM1-204ENST00000334895 TSPYL6Q8N831 410 aa27.87■■■□□ 2.05
TPM1-204ENST00000334895 PIGBQ92521 554 aa27.87■■■□□ 2.05
TPM1-204ENST00000334895 ACSBG1Q96GR2 724 aa27.87■■■□□ 2.05
TPM1-204ENST00000334895 TMOD3Q9NYL9 352 aa27.87■■■□□ 2.05
TPM1-204ENST00000334895 ZNF790Q6PG37 636 aa27.85■■■□□ 2.05
TPM1-204ENST00000334895 TNS1Q9HBL0 1735 aaKnown RBP27.85■■■□□ 2.05
TPM1-204ENST00000334895 UBR2Q8IWV8 1755 aa27.85■■■□□ 2.05
TPM1-204ENST00000334895 EIF4A1P60842 406 aaKnown RBP27.85■■■□□ 2.05
TPM1-204ENST00000334895 SYTL4Q96C24 671 aaPredicted RBP27.84■■■□□ 2.05
TPM1-204ENST00000334895 NHSQ6T4R5 1651 aa27.83■■■□□ 2.05
TPM1-204ENST00000334895 UPF1Q92900 1129 aaKnown RBP eCLIP27.83■■■□□ 2.05
TPM1-204ENST00000334895 KCNQ2O43526 872 aa27.82■■■□□ 2.04
TPM1-204ENST00000334895 FAM196AQ6ZSG2 479 aa27.82■■■□□ 2.04
TPM1-204ENST00000334895 ELL2O00472 640 aaPredicted RBP27.81■■■□□ 2.04
TPM1-204ENST00000334895 HEG1Q9ULI3 1381 aa27.81■■■□□ 2.04
TPM1-204ENST00000334895 KCPQ6ZWJ8 1503 aa27.81■■■□□ 2.04
TPM1-204ENST00000334895 VAMP4O75379 141 aa27.8■■■□□ 2.04
TPM1-204ENST00000334895 TWISTNBQ3B726 338 aaPredicted RBP27.8■■■□□ 2.04
TPM1-204ENST00000334895 RCAN3Q9UKA8 241 aa27.8■■■□□ 2.04
TPM1-204ENST00000334895 ASAP1Q9ULH1 1129 aa27.8■■■□□ 2.04
TPM1-204ENST00000334895 CT47B1P0C2W7 299 aaPredicted RBP27.79■■■□□ 2.04
TPM1-204ENST00000334895 PTF1AQ7RTS3 328 aa27.79■■■□□ 2.04
TPM1-204ENST00000334895 ZNF496Q96IT1 587 aaPredicted RBP27.79■■■□□ 2.04
TPM1-204ENST00000334895 ATG3Q9NT62 314 aa27.79■■■□□ 2.04
TPM1-204ENST00000334895 TTC5Q8N0Z6 440 aa27.78■■■□□ 2.04
TPM1-204ENST00000334895 C5P01031 1676 aa27.77■■■□□ 2.04
TPM1-204ENST00000334895 BTAF1O14981 1849 aa27.76■■■□□ 2.03
TPM1-204ENST00000334895 TRIM37O94972 964 aa27.75■■■□□ 2.03
TPM1-204ENST00000334895 GIGYF1O75420 1035 aaPredicted RBP27.74■■■□□ 2.03
TPM1-204ENST00000334895 RARSP54136 660 aaKnown RBP27.74■■■□□ 2.03
TPM1-204ENST00000334895 PRAMEF22A3QJZ6 481 aa27.74■■■□□ 2.03
TPM1-204ENST00000334895 FMNL2Q96PY5 1086 aa27.73■■■□□ 2.03
TPM1-204ENST00000334895 SOS1Q07889 1333 aaPredicted RBP27.72■■■□□ 2.03
TPM1-204ENST00000334895 PTCD1O75127 700 aaKnown RBP27.71■■■□□ 2.03
TPM1-204ENST00000334895 HOXB7P09629 217 aa27.7■■■□□ 2.03
TPM1-204ENST00000334895 SSH1Q8WYL5 1049 aa27.7■■■□□ 2.03
TPM1-204ENST00000334895 BCAR3O75815 825 aa27.7■■■□□ 2.02
TPM1-204ENST00000334895 ZNF428Q96B54 188 aa27.7■■■□□ 2.02
TPM1-204ENST00000334895 BCL2L13Q9BXK5 485 aa27.7■■■□□ 2.02
TPM1-204ENST00000334895 SUPT16HQ9Y5B9 1047 aaKnown RBP27.7■■■□□ 2.02
TPM1-204ENST00000334895 LAMB4A4D0S4 1761 aa27.69■■■□□ 2.02
TPM1-204ENST00000334895 TCERG1O14776 1098 aaKnown RBP27.68■■■□□ 2.02
TPM1-204ENST00000334895 CCDC125Q86Z20 511 aa27.68■■■□□ 2.02
TPM1-204ENST00000334895 SLC4A9Q96Q91 983 aa27.68■■■□□ 2.02
TPM1-204ENST00000334895 PALLDQ8WX93 1383 aa27.68■■■□□ 2.02
TPM1-204ENST00000334895 SNRPA1P09661 255 aaKnown RBP27.67■■■□□ 2.02
TPM1-204ENST00000334895 BCL11BQ9C0K0 894 aaPredicted RBP27.67■■■□□ 2.02
TPM1-204ENST00000334895 SF3B2Q13435 895 aaKnown RBP27.67■■■□□ 2.02
TPM1-204ENST00000334895 ALDH1L2Q3SY69 923 aa27.67■■■□□ 2.02
TPM1-204ENST00000334895 RNF123Q5XPI4 1314 aa27.66■■■□□ 2.02
TPM1-204ENST00000334895 TJP1Q07157 1748 aa27.66■■■□□ 2.02
TPM1-204ENST00000334895 NECTIN2Q92692 538 aa27.65■■■□□ 2.02
TPM1-204ENST00000334895 RBM42Q9BTD8 480 aaKnown RBP27.65■■■□□ 2.02
TPM1-204ENST00000334895 HDGFL1Q5TGJ6 251 aa27.64■■■□□ 2.02
TPM1-204ENST00000334895 DEFB132Q7Z7B7 95 aa27.64■■■□□ 2.02
TPM1-204ENST00000334895 SMARCC1Q92922 1105 aaPredicted RBP27.64■■■□□ 2.02
TPM1-204ENST00000334895 SMC4Q9NTJ3 1288 aa27.64■■■□□ 2.02
TPM1-204ENST00000334895 USP16Q9Y5T5 823 aa27.64■■■□□ 2.02
TPM1-204ENST00000334895 EIF2S2P20042 333 aaKnown RBP27.63■■■□□ 2.01
TPM1-204ENST00000334895 VSIG10Q8N0Z9 540 aa27.63■■■□□ 2.01
TPM1-204ENST00000334895 MRPL50Q8N5N7 158 aaKnown RBP27.63■■■□□ 2.01
TPM1-204ENST00000334895 CICQ96RK0 1608 aaPredicted RBP27.63■■■□□ 2.01
TPM1-204ENST00000334895 LY75O60449 1722 aa27.62■■■□□ 2.01
TPM1-204ENST00000334895 RGPD3A6NKT7 1758 aaPredicted RBP27.62■■■□□ 2.01
TPM1-204ENST00000334895 RGPD4Q7Z3J3 1758 aa27.62■■■□□ 2.01
TPM1-204ENST00000334895 APBA3O96018 575 aa27.62■■■□□ 2.01
TPM1-204ENST00000334895 CCDC30Q5VVM6 783 aa27.62■■■□□ 2.01
TPM1-204ENST00000334895 ZNF831Q5JPB2 1677 aa27.61■■■□□ 2.01
TPM1-204ENST00000334895 LOC102724428A0A0B4J2F2 783 aa27.6■■■□□ 2.01
TPM1-204ENST00000334895 BRPF1P55201 1214 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms