RNA–Protein interactions for RNA: ENST00000330752.12

HNRNPA1-201, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 5 BASIC

Gene HNRNPA1, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-201ENST00000330752 CABP4P57796 275 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
HNRNPA1-201ENST00000330752 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
HNRNPA1-201ENST00000330752 TJP1Q07157 1748 aa18.35■□□□□ 0.53
HNRNPA1-201ENST00000330752 C5P01031 1676 aa18.34■□□□□ 0.53
HNRNPA1-201ENST00000330752 TEFQ10587 303 aa18.34■□□□□ 0.53
HNRNPA1-201ENST00000330752 PIGBQ92521 554 aa18.34■□□□□ 0.53
HNRNPA1-201ENST00000330752 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
HNRNPA1-201ENST00000330752 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
HNRNPA1-201ENST00000330752 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
HNRNPA1-201ENST00000330752 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
HNRNPA1-201ENST00000330752 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.52
HNRNPA1-201ENST00000330752 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
HNRNPA1-201ENST00000330752 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
HNRNPA1-201ENST00000330752 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
HNRNPA1-201ENST00000330752 SENP3-EIF4A1A0A087X0R7 540 aa18.31■□□□□ 0.52
HNRNPA1-201ENST00000330752 APBA3O96018 575 aa18.31■□□□□ 0.52
HNRNPA1-201ENST00000330752 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
HNRNPA1-201ENST00000330752 PLSCR1O15162 318 aa18.3■□□□□ 0.52
HNRNPA1-201ENST00000330752 BAG6P46379 1132 aa18.3■□□□□ 0.52
HNRNPA1-201ENST00000330752 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
HNRNPA1-201ENST00000330752 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
HNRNPA1-201ENST00000330752 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
HNRNPA1-201ENST00000330752 WWC1Q8IX03 1113 aa18.28■□□□□ 0.52
HNRNPA1-201ENST00000330752 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
HNRNPA1-201ENST00000330752 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
HNRNPA1-201ENST00000330752 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
HNRNPA1-201ENST00000330752 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
HNRNPA1-201ENST00000330752 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
HNRNPA1-201ENST00000330752 C4BP0C0L5 1744 aa18.26■□□□□ 0.51
HNRNPA1-201ENST00000330752 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 SOCS7O14512 581 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
HNRNPA1-201ENST00000330752 IL16Q14005 1332 aa18.24■□□□□ 0.51
HNRNPA1-201ENST00000330752 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
HNRNPA1-201ENST00000330752 CAMKK2Q96RR4 588 aa18.24■□□□□ 0.51
HNRNPA1-201ENST00000330752 EZH2Q15910 746 aaKnown RBP18.23■□□□□ 0.51
HNRNPA1-201ENST00000330752 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
HNRNPA1-201ENST00000330752 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
HNRNPA1-201ENST00000330752 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 TSPYL4Q9UJ04 414 aa18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
HNRNPA1-201ENST00000330752 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 CHL1O00533 1208 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 KCNQ3O43525 872 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 SIK1P57059 783 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 GNAI1P63096 354 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 PROM2Q8N271 834 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 CCNL1Q9UK58 526 aaPredicted RBP18.21■□□□□ 0.51
HNRNPA1-201ENST00000330752 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.5
HNRNPA1-201ENST00000330752 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
HNRNPA1-201ENST00000330752 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
HNRNPA1-201ENST00000330752 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
HNRNPA1-201ENST00000330752 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
HNRNPA1-201ENST00000330752 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
HNRNPA1-201ENST00000330752 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
HNRNPA1-201ENST00000330752 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
HNRNPA1-201ENST00000330752 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
HNRNPA1-201ENST00000330752 ZBED9Q6R2W3 1325 aa18.17■□□□□ 0.5
HNRNPA1-201ENST00000330752 KCNQ4P56696 695 aa18.16■□□□□ 0.5
HNRNPA1-201ENST00000330752 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
HNRNPA1-201ENST00000330752 ITPK1Q13572 414 aa18.16■□□□□ 0.5
HNRNPA1-201ENST00000330752 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
HNRNPA1-201ENST00000330752 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
HNRNPA1-201ENST00000330752 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
HNRNPA1-201ENST00000330752 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
HNRNPA1-201ENST00000330752 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
HNRNPA1-201ENST00000330752 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
HNRNPA1-201ENST00000330752 E9PSI1 815 aa18.13■□□□□ 0.49
HNRNPA1-201ENST00000330752 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
HNRNPA1-201ENST00000330752 MYH16Q9H6N6 1097 aa18.13■□□□□ 0.49
HNRNPA1-201ENST00000330752 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
HNRNPA1-201ENST00000330752 CASZ1Q86V15 1759 aa18.12■□□□□ 0.49
HNRNPA1-201ENST00000330752 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
HNRNPA1-201ENST00000330752 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
HNRNPA1-201ENST00000330752 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
HNRNPA1-201ENST00000330752 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
HNRNPA1-201ENST00000330752 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
HNRNPA1-201ENST00000330752 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
HNRNPA1-201ENST00000330752 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms