RNA–Protein interactions for RNA: ENST00000326233.6

LCE1D-201, Transcript of late cornified envelope 1D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LCE1D, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1D-201ENST00000326233 CCDC125Q86Z20 511 aa23.42■■□□□ 1.34
LCE1D-201ENST00000326233 SF3B2Q13435 895 aaKnown RBP23.4■■□□□ 1.34
LCE1D-201ENST00000326233 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
LCE1D-201ENST00000326233 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
LCE1D-201ENST00000326233 BTAF1O14981 1849 aa23.4■■□□□ 1.34
LCE1D-201ENST00000326233 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.34
LCE1D-201ENST00000326233 APBA3O96018 575 aa23.39■■□□□ 1.33
LCE1D-201ENST00000326233 TAF7Q15545 349 aaPredicted RBP23.39■■□□□ 1.33
LCE1D-201ENST00000326233 SIPA1L3O60292 1781 aaPredicted RBP23.39■■□□□ 1.33
LCE1D-201ENST00000326233 CALD1Q05682 793 aaKnown RBP23.37■■□□□ 1.33
LCE1D-201ENST00000326233 ASAP1Q9ULH1 1129 aa23.37■■□□□ 1.33
LCE1D-201ENST00000326233 BTBD11A6QL63 1104 aa23.36■■□□□ 1.33
LCE1D-201ENST00000326233 SMARCC1Q92922 1105 aaPredicted RBP23.36■■□□□ 1.33
LCE1D-201ENST00000326233 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
LCE1D-201ENST00000326233 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
LCE1D-201ENST00000326233 PLSCR1O15162 318 aa23.34■■□□□ 1.33
LCE1D-201ENST00000326233 BAG6P46379 1132 aa23.34■■□□□ 1.33
LCE1D-201ENST00000326233 SLC39A6Q13433 755 aa23.34■■□□□ 1.33
LCE1D-201ENST00000326233 PALLDQ8WX93 1383 aa23.33■■□□□ 1.33
LCE1D-201ENST00000326233 WDR63Q8IWG1 891 aa23.33■■□□□ 1.33
LCE1D-201ENST00000326233 BABAM1Q9NWV8 329 aa23.33■■□□□ 1.33
LCE1D-201ENST00000326233 ZNF790Q6PG37 636 aa23.32■■□□□ 1.32
LCE1D-201ENST00000326233 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
LCE1D-201ENST00000326233 MIS18AQ9NYP9 233 aa23.32■■□□□ 1.32
LCE1D-201ENST00000326233 LAS1LQ9Y4W2 734 aaKnown RBP23.32■■□□□ 1.32
LCE1D-201ENST00000326233 ZNF521Q96K83 1311 aa23.32■■□□□ 1.32
LCE1D-201ENST00000326233 PAPPAQ13219 1627 aa23.31■■□□□ 1.32
LCE1D-201ENST00000326233 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
LCE1D-201ENST00000326233 IFT57Q9NWB7 429 aa23.31■■□□□ 1.32
LCE1D-201ENST00000326233 TSPYL4Q9UJ04 414 aa23.31■■□□□ 1.32
LCE1D-201ENST00000326233 IL16Q14005 1332 aa23.31■■□□□ 1.32
LCE1D-201ENST00000326233 CHL1O00533 1208 aa23.3■■□□□ 1.32
LCE1D-201ENST00000326233 ZNF853P0CG23 659 aa23.3■■□□□ 1.32
LCE1D-201ENST00000326233 GNAI1P63096 354 aa23.3■■□□□ 1.32
LCE1D-201ENST00000326233 DEFB132Q7Z7B7 95 aa23.3■■□□□ 1.32
LCE1D-201ENST00000326233 KCNQ3O43525 872 aa23.29■■□□□ 1.32
LCE1D-201ENST00000326233 EN1Q05925 392 aaPredicted RBP23.29■■□□□ 1.32
LCE1D-201ENST00000326233 PTCD1O75127 700 aaKnown RBP23.28■■□□□ 1.32
LCE1D-201ENST00000326233 CAMKK2Q96RR4 588 aa23.28■■□□□ 1.32
LCE1D-201ENST00000326233 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
LCE1D-201ENST00000326233 LY75O60449 1722 aa23.28■■□□□ 1.32
LCE1D-201ENST00000326233 RGPD3A6NKT7 1758 aaPredicted RBP23.27■■□□□ 1.32
LCE1D-201ENST00000326233 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
LCE1D-201ENST00000326233 RGPD4Q7Z3J3 1758 aa23.27■■□□□ 1.32
LCE1D-201ENST00000326233 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
LCE1D-201ENST00000326233 SIK1P57059 783 aa23.27■■□□□ 1.32
LCE1D-201ENST00000326233 EZH2Q15910 746 aaKnown RBP23.26■■□□□ 1.31
LCE1D-201ENST00000326233 TXNRD1Q16881 649 aa23.26■■□□□ 1.31
LCE1D-201ENST00000326233 KCPQ6ZWJ8 1503 aa23.26■■□□□ 1.31
LCE1D-201ENST00000326233 UBR2Q8IWV8 1755 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 SLC27A3Q5K4L6 730 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 PROM2Q8N271 834 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
LCE1D-201ENST00000326233 FMNL2Q96PY5 1086 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 MBIPQ9NS73 344 aa23.25■■□□□ 1.31
LCE1D-201ENST00000326233 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
LCE1D-201ENST00000326233 SOCS7O14512 581 aa23.24■■□□□ 1.31
LCE1D-201ENST00000326233 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
LCE1D-201ENST00000326233 EIF4A1P60842 406 aaKnown RBP23.23■■□□□ 1.31
LCE1D-201ENST00000326233 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
LCE1D-201ENST00000326233 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
LCE1D-201ENST00000326233 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
LCE1D-201ENST00000326233 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
LCE1D-201ENST00000326233 HEG1Q9ULI3 1381 aa23.22■■□□□ 1.31
LCE1D-201ENST00000326233 KCNQ4P56696 695 aa23.21■■□□□ 1.31
LCE1D-201ENST00000326233 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
LCE1D-201ENST00000326233 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
LCE1D-201ENST00000326233 LRRC4BQ9NT99 713 aa23.21■■□□□ 1.31
LCE1D-201ENST00000326233 ZNF831Q5JPB2 1677 aa23.2■■□□□ 1.3
LCE1D-201ENST00000326233 E9PSI1 815 aa23.2■■□□□ 1.3
LCE1D-201ENST00000326233 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
LCE1D-201ENST00000326233 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
LCE1D-201ENST00000326233 ITPK1Q13572 414 aa23.19■■□□□ 1.3
LCE1D-201ENST00000326233 RREB1Q92766 1687 aa23.19■■□□□ 1.3
LCE1D-201ENST00000326233 SNRPA1P09661 255 aaKnown RBP23.18■■□□□ 1.3
LCE1D-201ENST00000326233 HMGB2P26583 209 aaKnown RBP23.18■■□□□ 1.3
LCE1D-201ENST00000326233 CDCA7LQ96GN5 454 aa23.18■■□□□ 1.3
LCE1D-201ENST00000326233 DNAJC10Q8IXB1 793 aa23.17■■□□□ 1.3
LCE1D-201ENST00000326233 YTHDC1Q96MU7 727 aaKnown RBP23.17■■□□□ 1.3
LCE1D-201ENST00000326233 TEX13AQ9BXU3 409 aaPredicted RBP23.17■■□□□ 1.3
LCE1D-201ENST00000326233 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
LCE1D-201ENST00000326233 GIGYF1O75420 1035 aaPredicted RBP23.16■■□□□ 1.3
LCE1D-201ENST00000326233 KRT24Q2M2I5 525 aa23.16■■□□□ 1.3
LCE1D-201ENST00000326233 TJP1Q07157 1748 aa23.16■■□□□ 1.3
LCE1D-201ENST00000326233 PRAMEF22A3QJZ6 481 aa23.15■■□□□ 1.3
LCE1D-201ENST00000326233 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
LCE1D-201ENST00000326233 C5P01031 1676 aa23.14■■□□□ 1.29
LCE1D-201ENST00000326233 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.29
LCE1D-201ENST00000326233 TAF1LQ8IZX4 1826 aa23.14■■□□□ 1.29
LCE1D-201ENST00000326233 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
LCE1D-201ENST00000326233 STARD3NLO95772 234 aa23.13■■□□□ 1.29
LCE1D-201ENST00000326233 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
LCE1D-201ENST00000326233 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
LCE1D-201ENST00000326233 CYP19A1P11511 503 aaPredicted RBP23.12■■□□□ 1.29
LCE1D-201ENST00000326233 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
LCE1D-201ENST00000326233 COL5A3P25940 1745 aaPredicted RBP23.11■■□□□ 1.29
LCE1D-201ENST00000326233 HOXB7P09629 217 aa23.11■■□□□ 1.29
LCE1D-201ENST00000326233 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
LCE1D-201ENST00000326233 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms