RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 CEP126Q9P2H0 1117 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 CCT2P78371 535 aaKnown RBP19.6■□□□□ 0.73
CLIP4-201ENST00000320081 TTC22Q5TAA0 569 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 MAP3K2Q9Y2U5 619 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
CLIP4-201ENST00000320081 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLIP4-201ENST00000320081 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 MRPL50Q8N5N7 158 aaKnown RBP19.6■□□□□ 0.73
CLIP4-201ENST00000320081 ZBTB40Q9NUA8 1239 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 A2MP01023 1474 aa19.6■□□□□ 0.73
CLIP4-201ENST00000320081 GPTP24298 496 aa19.59■□□□□ 0.73
CLIP4-201ENST00000320081 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
CLIP4-201ENST00000320081 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
CLIP4-201ENST00000320081 NOC3LQ8WTT2 800 aaKnown RBP19.59■□□□□ 0.73
CLIP4-201ENST00000320081 GLRX3O76003 335 aaKnown RBP19.59■□□□□ 0.73
CLIP4-201ENST00000320081 HDAC1Q13547 482 aaPredicted RBP19.59■□□□□ 0.73
CLIP4-201ENST00000320081 TMX4Q9H1E5 349 aaPredicted RBP19.59■□□□□ 0.73
CLIP4-201ENST00000320081 CCDC158Q5M9N0 1113 aa19.58■□□□□ 0.73
CLIP4-201ENST00000320081 CPA1P15085 419 aa19.58■□□□□ 0.72
CLIP4-201ENST00000320081 ZNF771Q7L3S4 317 aaPredicted RBP19.58■□□□□ 0.72
CLIP4-201ENST00000320081 ANKRD36BQ8N2N9 1353 aa19.58■□□□□ 0.72
CLIP4-201ENST00000320081 A0A087WZG4 1122 aa19.58■□□□□ 0.72
CLIP4-201ENST00000320081 CABLES1Q8TDN4 633 aa19.58■□□□□ 0.72
CLIP4-201ENST00000320081 WDR62O43379 1518 aa19.58■□□□□ 0.72
CLIP4-201ENST00000320081 HAND2P61296 217 aa19.57■□□□□ 0.72
CLIP4-201ENST00000320081 ABCF2Q9UG63 623 aa19.57■□□□□ 0.72
CLIP4-201ENST00000320081 ZNF830Q96NB3 372 aaPredicted RBP19.57■□□□□ 0.72
CLIP4-201ENST00000320081 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
CLIP4-201ENST00000320081 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
CLIP4-201ENST00000320081 PDE1AP54750 535 aa19.56■□□□□ 0.72
CLIP4-201ENST00000320081 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
CLIP4-201ENST00000320081 TMX3Q96JJ7 454 aa19.56■□□□□ 0.72
CLIP4-201ENST00000320081 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
CLIP4-201ENST00000320081 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
CLIP4-201ENST00000320081 KDM6BO15054 1643 aa19.55■□□□□ 0.72
CLIP4-201ENST00000320081 KIF6Q6ZMV9 814 aa19.55■□□□□ 0.72
CLIP4-201ENST00000320081 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
CLIP4-201ENST00000320081 ASXL2Q76L83 1435 aa19.54■□□□□ 0.72
CLIP4-201ENST00000320081 TSR1Q2NL82 804 aaKnown RBP19.54■□□□□ 0.72
CLIP4-201ENST00000320081 CWF19L2Q2TBE0 894 aaKnown RBP19.54■□□□□ 0.72
CLIP4-201ENST00000320081 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
CLIP4-201ENST00000320081 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
CLIP4-201ENST00000320081 POLR3AO14802 1390 aaPredicted RBP19.54■□□□□ 0.72
CLIP4-201ENST00000320081 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
CLIP4-201ENST00000320081 UQCRHP07919 91 aa19.54■□□□□ 0.72
CLIP4-201ENST00000320081 RHPN1Q8TCX5 695 aa19.53■□□□□ 0.72
CLIP4-201ENST00000320081 MPHOSPH8Q99549 860 aa19.53■□□□□ 0.72
CLIP4-201ENST00000320081 HIP1O00291 1037 aa19.53■□□□□ 0.72
CLIP4-201ENST00000320081 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
CLIP4-201ENST00000320081 DBF4Q9UBU7 674 aaPredicted RBP19.53■□□□□ 0.72
CLIP4-201ENST00000320081 ISM2Q6H9L7 571 aa19.52■□□□□ 0.72
CLIP4-201ENST00000320081 ZSCAN30Q86W11 494 aa19.52■□□□□ 0.72
CLIP4-201ENST00000320081 ANKRD44Q8N8A2 993 aa19.52■□□□□ 0.72
CLIP4-201ENST00000320081 CHAMP1Q96JM3 812 aa19.52■□□□□ 0.72
CLIP4-201ENST00000320081 SMC5Q8IY18 1101 aa19.52■□□□□ 0.71
CLIP4-201ENST00000320081 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 GOLIM4O00461 696 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 SKIDA1Q1XH10 827 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 CCDC144CPQ8IYA2 1237 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 EYA1Q99502 592 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 DENND4BO75064 1496 aaPredicted RBP19.51■□□□□ 0.71
CLIP4-201ENST00000320081 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 MNS1Q8NEH6 495 aa19.51■□□□□ 0.71
CLIP4-201ENST00000320081 KIAA0556O60303 1618 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 ECHDC1Q9NTX5 307 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 SLC4A8Q2Y0W8 1093 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 NOL10Q9BSC4 688 aaKnown RBP19.5■□□□□ 0.71
CLIP4-201ENST00000320081 CFAP43Q8NDM7 1665 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 BIN1O00499 593 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 TPM1P09493 284 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
CLIP4-201ENST00000320081 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
CLIP4-201ENST00000320081 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
CLIP4-201ENST00000320081 METTL24Q5JXM2 366 aa19.49■□□□□ 0.71
CLIP4-201ENST00000320081 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
CLIP4-201ENST00000320081 LIMCH1Q9UPQ0 1083 aa19.49■□□□□ 0.71
CLIP4-201ENST00000320081 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
CLIP4-201ENST00000320081 GJB2P29033 226 aa19.49■□□□□ 0.71
CLIP4-201ENST00000320081 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
CLIP4-201ENST00000320081 SERPINC1P01008 464 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 IFIT1P09914 478 aaKnown RBP19.48■□□□□ 0.71
CLIP4-201ENST00000320081 ATP2B2Q01814 1243 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
CLIP4-201ENST00000320081 KLHDC4Q8TBB5 520 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 MAP3K19Q56UN5 1328 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 COPS6Q7L5N1 327 aa19.48■□□□□ 0.71
CLIP4-201ENST00000320081 A0A0U1RQG5 324 aaPredicted RBP19.47■□□□□ 0.71
CLIP4-201ENST00000320081 ADAMTS2O95450 1211 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 PTPRCP08575 1304 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 OLFM4Q6UX06 510 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 IL16Q14005 1332 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 TDO2P48775 406 aa19.47■□□□□ 0.71
CLIP4-201ENST00000320081 ANKRD24Q8TF21 1146 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms