RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CUL5Q93034 780 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 RUSC2Q8N2Y8 1516 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 PIP4K2BP78356 416 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 NCBP1Q09161 790 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 MVPQ14764 893 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 TPRNQ4KMQ1 711 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ZSCAN31Q96LW9 406 aaPredicted RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 CABP2Q9NPB3 220 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 CABP1Q9NZU7 370 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 AMPD3Q01432 767 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 SLKQ9H2G2 1235 aaPredicted RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ARHGEF10O15013 1369 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 HSP90AB2PQ58FF8 381 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ZFYVE27Q5T4F4 411 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 TCP11L2Q8N4U5 519 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 AIDAQ96BJ3 306 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 MKNK2Q9HBH9 465 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 BABAM1Q9NWV8 329 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 TMOD4Q9NZQ9 345 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 KIAA0556O60303 1618 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 WASLO00401 505 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 BMP15O95972 392 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CASTP20810 708 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PDE6BP35913 854 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 DRC1Q96MC2 740 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 SHANK2Q9UPX8 1470 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 SLC4A2P04920 1241 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 HMOX1P09601 288 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC172P0C7W6 258 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 SLC5A1P13866 664 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 GGNBP2Q9H3C7 697 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CABP5Q9NP86 173 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 KCNG1Q9UIX4 513 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PHF8Q9UPP1 1060 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 NEO1Q92859 1461 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ASXL2Q76L83 1435 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ABCA5Q8WWZ7 1642 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ZFYP08048 801 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 TDO2P48775 406 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 TMEM266Q2M3C6 531 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 DZIP1Q86YF9 867 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 SLC26A8Q96RN1 970 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PNMA2Q9UL42 364 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ABCC2Q92887 1545 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 TNNI2P48788 182 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 HOMER1Q86YM7 354 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF444Q8N0Y2 327 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CRACR2BQ8N4Y2 399 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 AMOTL2Q9Y2J4 779 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 WDR33Q9C0J8 1336 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 NUTM2BA6NNL0 878 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 NUTM2EB1AL46 878 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 GNAQP50148 359 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 HMGN5P82970 282 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 NUTM2AQ8IVF1 878 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ADAMTS12P58397 1594 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 IL16Q14005 1332 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CBFA2T2O43439 604 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF76P36508 570 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC112Q8NEF3 446 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CTCFLQ8NI51 663 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PLVAPQ9BX97 442 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 GLT8D2Q9H1C3 349 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PDCL3Q9H2J4 239 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 URB2Q14146 1524 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 KRT85P78386 507 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC152Q4G0S7 254 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 BRDTQ58F21 947 aaPredicted RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 KANK3Q6NY19 840 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 JDP2Q8WYK2 163 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 BAG4O95429 457 aaKnown RBP3.74□□□□□ -1.81
CLOCK-201ENST00000309964 HOOK3Q86VS8 718 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 NLRP3Q96P20 1036 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 HAUS2Q9NVX0 235 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 ANKRD36BQ8N2N9 1353 aa3.74□□□□□ -1.81
CLOCK-201ENST00000309964 PLIN1O60240 522 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 FERMT2Q96AC1 680 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SH2D4AQ9H788 454 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 EZRP15311 586 aaKnown RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 MCM3P25205 808 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 TMEM132EQ6IEE7 984 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 BLOC1S2Q6QNY1 142 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 UQCRFS1P1P0C7P4 283 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 TPTE2Q6XPS3 522 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC82Q8N4S0 544 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 NAPBQ9H115 298 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 GOLGA6L7A0A1B0GV03 622 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 ANKRD18BA2A2Z9 1011 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 GOLGA6L10A6NI86 522 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SRGAP3O43295 1099 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 NBPF7P0C2Y1 421 aaPredicted RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 EYA3Q99504 573 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF644Q9H582 1327 aaPredicted RBP3.73□□□□□ -1.81
CLOCK-201ENST00000309964 PLXNC1O60486 1568 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 NT5C2P49902 561 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SETDB2Q96T68 719 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 PDZRN3Q9UPQ7 1066 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 STK24Q9Y6E0 443 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SMTNL1A8MU46 457 aa3.73□□□□□ -1.81
CLOCK-201ENST00000309964 SNRPA1P09661 255 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms