RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 BMP2KLQ5H9B9 411 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 MPNDQ8N594 471 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 CCDC43Q96MW1 224 aaKnown RBP19.34■□□□□ 0.69
BRD3-201ENST00000303407 NUP62CLQ9H1M0 184 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
BRD3-201ENST00000303407 SYCE3A1L190 88 aa19.34■□□□□ 0.69
BRD3-201ENST00000303407 TXLNAP40222 546 aa19.33■□□□□ 0.69
BRD3-201ENST00000303407 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.69
BRD3-201ENST00000303407 SSFA2P28290 1259 aa19.33■□□□□ 0.68
BRD3-201ENST00000303407 CDKL5O76039 1030 aa19.33■□□□□ 0.68
BRD3-201ENST00000303407 NUCB1Q02818 461 aa19.33■□□□□ 0.68
BRD3-201ENST00000303407 HYPKQ9NX55 129 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 TNRQ92752 1358 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 DDX11Q96FC9 970 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 TBC1D32Q96NH3 1257 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 IMMTQ16891 758 aaKnown RBP19.32■□□□□ 0.68
BRD3-201ENST00000303407 FILIP1LQ4L180 1135 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
BRD3-201ENST00000303407 DBF4Q9UBU7 674 aaPredicted RBP19.32■□□□□ 0.68
BRD3-201ENST00000303407 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
BRD3-201ENST00000303407 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
BRD3-201ENST00000303407 STARD3NLO95772 234 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 SERPINC1P01008 464 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 EPS15P42566 896 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 TTC22Q5TAA0 569 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 CCP110O43303 1012 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 TDO2P48775 406 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 IKQ13123 557 aaPredicted RBP19.31■□□□□ 0.68
BRD3-201ENST00000303407 TTLL5Q6EMB2 1281 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 FOXO3O43524 673 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 PTCD1O75127 700 aaKnown RBP19.31■□□□□ 0.68
BRD3-201ENST00000303407 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
BRD3-201ENST00000303407 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 METTL24Q5JXM2 366 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 TMOD3Q9NYL9 352 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 IDH1O75874 414 aaKnown RBP19.3■□□□□ 0.68
BRD3-201ENST00000303407 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
BRD3-201ENST00000303407 CDK5RAP3Q96JB5 506 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
BRD3-201ENST00000303407 MAGEC2Q9UBF1 373 aaPredicted RBP19.29■□□□□ 0.68
BRD3-201ENST00000303407 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
BRD3-201ENST00000303407 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
BRD3-201ENST00000303407 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
BRD3-201ENST00000303407 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
BRD3-201ENST00000303407 MTERF4Q7Z6M4 381 aaKnown RBP19.29■□□□□ 0.68
BRD3-201ENST00000303407 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
BRD3-201ENST00000303407 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
BRD3-201ENST00000303407 DACH1Q9UI36 760 aa19.28■□□□□ 0.68
BRD3-201ENST00000303407 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
BRD3-201ENST00000303407 IGHMBP2P38935 993 aaKnown RBP19.28■□□□□ 0.68
BRD3-201ENST00000303407 AIDAQ96BJ3 306 aa19.28■□□□□ 0.68
BRD3-201ENST00000303407 HMGN5P82970 282 aaKnown RBP19.27■□□□□ 0.68
BRD3-201ENST00000303407 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 CAMK4Q16566 473 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 FERMT3Q86UX7 667 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 UBAC1Q9BSL1 405 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 UHRF1BP1Q6BDS2 1440 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.68
BRD3-201ENST00000303407 SH2B1Q9NRF2 756 aaPredicted RBP19.27■□□□□ 0.68
BRD3-201ENST00000303407 IFIT1P09914 478 aaKnown RBP19.27■□□□□ 0.67
BRD3-201ENST00000303407 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.67
BRD3-201ENST00000303407 ADGRL2O95490 1459 aa19.27■□□□□ 0.67
BRD3-201ENST00000303407 CAGE1Q8TC20 777 aa19.27■□□□□ 0.67
BRD3-201ENST00000303407 MAP7D2Q96T17 732 aa19.27■□□□□ 0.67
BRD3-201ENST00000303407 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.67
BRD3-201ENST00000303407 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
BRD3-201ENST00000303407 CARD14Q9BXL6 1004 aa19.26■□□□□ 0.67
BRD3-201ENST00000303407 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
BRD3-201ENST00000303407 ABCC1P33527 1531 aa19.26■□□□□ 0.67
BRD3-201ENST00000303407 PIP4K2AP48426 406 aaPredicted RBP19.26■□□□□ 0.67
BRD3-201ENST00000303407 HSP90AB2PQ58FF8 381 aa19.26■□□□□ 0.67
BRD3-201ENST00000303407 ESPNB1AK53 854 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 ACBD3Q9H3P7 528 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
BRD3-201ENST00000303407 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 EVI5LQ96CN4 794 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 BICDL1Q6ZP65 573 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 KRT28Q7Z3Y7 464 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 LIMCH1Q9UPQ0 1083 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 TTC21AQ8NDW8 1320 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 PPP1R42Q7Z4L9 355 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 CEP57L1Q8IYX8 460 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 RUFY1Q96T51 708 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
BRD3-201ENST00000303407 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
BRD3-201ENST00000303407 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
BRD3-201ENST00000303407 C8orf34Q49A92 452 aa19.24■□□□□ 0.67
BRD3-201ENST00000303407 CCDC183Q5T5S1 534 aa19.24■□□□□ 0.67
BRD3-201ENST00000303407 WASF1Q92558 559 aa19.24■□□□□ 0.67
BRD3-201ENST00000303407 DHX8Q14562 1220 aaKnown RBP19.23■□□□□ 0.67
BRD3-201ENST00000303407 AK7Q96M32 723 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms