RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF592Q92610 1267 aa17.64■□□□□ 0.42
COL6A2-201ENST00000300527 ZNF771Q7L3S4 317 aaPredicted RBP17.64■□□□□ 0.41
COL6A2-201ENST00000300527 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.41
COL6A2-201ENST00000300527 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
COL6A2-201ENST00000300527 IL25Q9H293 177 aa17.64■□□□□ 0.41
COL6A2-201ENST00000300527 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 KDM4AO75164 1064 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 GNAI2P04899 355 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 CUL4AQ13619 759 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 GLI2P10070 1586 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 C16orf45Q96MC5 204 aaPredicted RBP17.63■□□□□ 0.41
COL6A2-201ENST00000300527 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
COL6A2-201ENST00000300527 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
COL6A2-201ENST00000300527 MYO3AQ8NEV4 1616 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
COL6A2-201ENST00000300527 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
COL6A2-201ENST00000300527 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 FOXO3O43524 673 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
COL6A2-201ENST00000300527 PTGS1P23219 599 aa17.61■□□□□ 0.41
COL6A2-201ENST00000300527 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
COL6A2-201ENST00000300527 DIAPH3Q9NSV4 1193 aa17.61■□□□□ 0.41
COL6A2-201ENST00000300527 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
COL6A2-201ENST00000300527 STX6O43752 255 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 SYT1P21579 422 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 AP5Z1O43299 807 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 ZSCAN22P10073 491 aaPredicted RBP17.6■□□□□ 0.41
COL6A2-201ENST00000300527 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
COL6A2-201ENST00000300527 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
COL6A2-201ENST00000300527 INTS4Q96HW7 963 aaKnown RBP17.6■□□□□ 0.41
COL6A2-201ENST00000300527 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
COL6A2-201ENST00000300527 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
COL6A2-201ENST00000300527 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
COL6A2-201ENST00000300527 AK2P54819 239 aa17.59■□□□□ 0.41
COL6A2-201ENST00000300527 NAA30Q147X3 362 aaPredicted RBP17.59■□□□□ 0.41
COL6A2-201ENST00000300527 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
COL6A2-201ENST00000300527 UBE2HP62256 183 aa17.59■□□□□ 0.41
COL6A2-201ENST00000300527 ARHGAP31Q2M1Z3 1444 aa17.58■□□□□ 0.41
COL6A2-201ENST00000300527 LRMPQ12912 555 aa17.58■□□□□ 0.41
COL6A2-201ENST00000300527 KCNF1Q9H3M0 494 aa17.58■□□□□ 0.41
COL6A2-201ENST00000300527 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
COL6A2-201ENST00000300527 VWDEQ8N2E2 1590 aa17.58■□□□□ 0.4
COL6A2-201ENST00000300527 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
COL6A2-201ENST00000300527 LUZP1Q86V48 1076 aa17.57■□□□□ 0.4
COL6A2-201ENST00000300527 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
COL6A2-201ENST00000300527 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
COL6A2-201ENST00000300527 NECAB1Q8N987 351 aa17.57■□□□□ 0.4
COL6A2-201ENST00000300527 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
COL6A2-201ENST00000300527 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
COL6A2-201ENST00000300527 NPHP1O15259 732 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 KCNJ4P48050 445 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
COL6A2-201ENST00000300527 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 MROH1Q8NDA8 1641 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 USP32Q8NFA0 1604 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 F13A1P00488 732 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
COL6A2-201ENST00000300527 CCDC186Q7Z3E2 898 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL6A2-201ENST00000300527 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
COL6A2-201ENST00000300527 LARGE1O95461 756 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL6A2-201ENST00000300527 GJB2P29033 226 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 KIAA1524Q8TCG1 905 aa17.56■□□□□ 0.4
COL6A2-201ENST00000300527 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 PTPRCP08575 1304 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 CCT4P50991 539 aaKnown RBP17.55■□□□□ 0.4
COL6A2-201ENST00000300527 CD163L1Q9NR16 1453 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 CHL1O00533 1208 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
COL6A2-201ENST00000300527 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
COL6A2-201ENST00000300527 UTP14CQ5TAP6 766 aaKnown RBP17.55■□□□□ 0.4
COL6A2-201ENST00000300527 ARHGEF40Q8TER5 1519 aa17.54■□□□□ 0.4
COL6A2-201ENST00000300527 LETM1O95202 739 aaPredicted RBP17.54■□□□□ 0.4
COL6A2-201ENST00000300527 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
COL6A2-201ENST00000300527 TCEANC2Q96MN5 208 aa17.54■□□□□ 0.4
COL6A2-201ENST00000300527 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
COL6A2-201ENST00000300527 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
COL6A2-201ENST00000300527 ANAPC15P60006 121 aa17.54■□□□□ 0.4
COL6A2-201ENST00000300527 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
COL6A2-201ENST00000300527 FBXW7Q969H0 707 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
COL6A2-201ENST00000300527 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 SNX14Q9Y5W7 946 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 ABCC3O15438 1527 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 GTPBP4Q9BZE4 634 aaKnown RBP17.53■□□□□ 0.4
COL6A2-201ENST00000300527 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 RPAP1Q9BWH6 1393 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms