RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 G2E3Q7L622 706 aa16.81■□□□□ 0.28
NCSTN-201ENST00000294785 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
NCSTN-201ENST00000294785 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
NCSTN-201ENST00000294785 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
NCSTN-201ENST00000294785 SOX12O15370 315 aa16.8■□□□□ 0.28
NCSTN-201ENST00000294785 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
NCSTN-201ENST00000294785 CLCN1P35523 988 aa16.79■□□□□ 0.28
NCSTN-201ENST00000294785 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
NCSTN-201ENST00000294785 NWD1Q149M9 1564 aa16.79■□□□□ 0.28
NCSTN-201ENST00000294785 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
NCSTN-201ENST00000294785 F6X3S4 739 aa16.78■□□□□ 0.28
NCSTN-201ENST00000294785 APBB1O00213 710 aa16.78■□□□□ 0.28
NCSTN-201ENST00000294785 FLIIQ13045 1269 aa16.78■□□□□ 0.28
NCSTN-201ENST00000294785 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
NCSTN-201ENST00000294785 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
NCSTN-201ENST00000294785 MCM2P49736 904 aa16.76■□□□□ 0.27
NCSTN-201ENST00000294785 SRCIN1Q9C0H9 1055 aa16.76■□□□□ 0.27
NCSTN-201ENST00000294785 DDX49Q9Y6V7 483 aaKnown RBP16.76■□□□□ 0.27
NCSTN-201ENST00000294785 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
NCSTN-201ENST00000294785 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
NCSTN-201ENST00000294785 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-201ENST00000294785 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-201ENST00000294785 HOXC9P31274 260 aa16.75■□□□□ 0.27
NCSTN-201ENST00000294785 AOX1Q06278 1338 aa16.75■□□□□ 0.27
NCSTN-201ENST00000294785 NLRP6P59044 892 aa16.75■□□□□ 0.27
NCSTN-201ENST00000294785 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
NCSTN-201ENST00000294785 MX1P20591 662 aa16.74■□□□□ 0.27
NCSTN-201ENST00000294785 ANAPC15P60006 121 aa16.74■□□□□ 0.27
NCSTN-201ENST00000294785 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
NCSTN-201ENST00000294785 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
NCSTN-201ENST00000294785 MCCP23508 829 aa16.74■□□□□ 0.27
NCSTN-201ENST00000294785 THEMISQ8N1K5 641 aaPredicted RBP16.74■□□□□ 0.27
NCSTN-201ENST00000294785 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
NCSTN-201ENST00000294785 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
NCSTN-201ENST00000294785 IL17RAQ96F46 866 aa16.73■□□□□ 0.27
NCSTN-201ENST00000294785 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
NCSTN-201ENST00000294785 ZNF445P59923 1031 aa16.73■□□□□ 0.27
NCSTN-201ENST00000294785 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
NCSTN-201ENST00000294785 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
NCSTN-201ENST00000294785 LTN1O94822 1766 aa16.72■□□□□ 0.27
NCSTN-201ENST00000294785 CCDC173Q0VFZ6 552 aa16.72■□□□□ 0.27
NCSTN-201ENST00000294785 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
NCSTN-201ENST00000294785 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
NCSTN-201ENST00000294785 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
NCSTN-201ENST00000294785 ESPNB1AK53 854 aa16.71■□□□□ 0.27
NCSTN-201ENST00000294785 PNMA6EA0A0J9YXQ4 647 aa16.7■□□□□ 0.26
NCSTN-201ENST00000294785 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
NCSTN-201ENST00000294785 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
NCSTN-201ENST00000294785 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
NCSTN-201ENST00000294785 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 CHMLP26374 656 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
NCSTN-201ENST00000294785 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
NCSTN-201ENST00000294785 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
NCSTN-201ENST00000294785 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
NCSTN-201ENST00000294785 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
NCSTN-201ENST00000294785 HOXB7P09629 217 aa16.68■□□□□ 0.26
NCSTN-201ENST00000294785 NEK4P51957 841 aa16.68■□□□□ 0.26
NCSTN-201ENST00000294785 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
NCSTN-201ENST00000294785 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
NCSTN-201ENST00000294785 CUL4AQ13619 759 aa16.68■□□□□ 0.26
NCSTN-201ENST00000294785 PKP1Q13835 747 aa16.68■□□□□ 0.26
NCSTN-201ENST00000294785 PHRF1Q9P1Y6 1649 aaKnown RBP16.68■□□□□ 0.26
NCSTN-201ENST00000294785 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
NCSTN-201ENST00000294785 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
NCSTN-201ENST00000294785 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
NCSTN-201ENST00000294785 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
NCSTN-201ENST00000294785 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
NCSTN-201ENST00000294785 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
NCSTN-201ENST00000294785 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
NCSTN-201ENST00000294785 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
NCSTN-201ENST00000294785 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
NCSTN-201ENST00000294785 RILPL2Q969X0 211 aa16.65■□□□□ 0.26
NCSTN-201ENST00000294785 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
NCSTN-201ENST00000294785 NFAT5O94916 1531 aa16.65■□□□□ 0.26
NCSTN-201ENST00000294785 POLA2Q14181 598 aa16.65■□□□□ 0.26
NCSTN-201ENST00000294785 KCNA6P17658 529 aa16.64■□□□□ 0.25
NCSTN-201ENST00000294785 TSHZ3Q63HK5 1081 aa16.64■□□□□ 0.25
NCSTN-201ENST00000294785 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
NCSTN-201ENST00000294785 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
NCSTN-201ENST00000294785 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
NCSTN-201ENST00000294785 MBD3O95983 291 aa16.63■□□□□ 0.25
NCSTN-201ENST00000294785 IP6K1Q92551 441 aa16.63■□□□□ 0.25
NCSTN-201ENST00000294785 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
NCSTN-201ENST00000294785 PRPF40AO75400 957 aaKnown RBP16.63■□□□□ 0.25
NCSTN-201ENST00000294785 BRD1O95696 1058 aa16.63■□□□□ 0.25
NCSTN-201ENST00000294785 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
NCSTN-201ENST00000294785 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
NCSTN-201ENST00000294785 HSP90AB4PQ58FF6 505 aa16.62■□□□□ 0.25
NCSTN-201ENST00000294785 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
NCSTN-201ENST00000294785 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
NCSTN-201ENST00000294785 KIF1BPQ96EK5 621 aa16.62■□□□□ 0.25
NCSTN-201ENST00000294785 PALD1Q9ULE6 856 aa16.62■□□□□ 0.25
NCSTN-201ENST00000294785 HS1BP3Q53T59 392 aa16.61■□□□□ 0.25
NCSTN-201ENST00000294785 PPP1R42Q7Z4L9 355 aa16.61■□□□□ 0.25
NCSTN-201ENST00000294785 HSPA4P34932 840 aa16.61■□□□□ 0.25
NCSTN-201ENST00000294785 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms