RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 KCNA6P17658 529 aa19.21■□□□□ 0.67
SMAD6-201ENST00000288840 RBM10P98175 930 aaKnown RBP19.21■□□□□ 0.67
SMAD6-201ENST00000288840 CCDC8Q9H0W5 538 aaPredicted RBP19.21■□□□□ 0.67
SMAD6-201ENST00000288840 CWC22Q9HCG8 908 aaKnown RBP19.21■□□□□ 0.67
SMAD6-201ENST00000288840 INO80Q9ULG1 1556 aaPredicted RBP19.21■□□□□ 0.67
SMAD6-201ENST00000288840 TCEANC2Q96MN5 208 aa19.21■□□□□ 0.67
SMAD6-201ENST00000288840 AACSQ86V21 672 aa19.21■□□□□ 0.67
SMAD6-201ENST00000288840 PA2G4Q9UQ80 394 aaKnown RBP19.21■□□□□ 0.67
SMAD6-201ENST00000288840 HECW2Q9P2P5 1572 aa19.2■□□□□ 0.66
SMAD6-201ENST00000288840 ZKSCAN1P17029 563 aaPredicted RBP19.2■□□□□ 0.66
SMAD6-201ENST00000288840 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
SMAD6-201ENST00000288840 LGR6Q9HBX8 967 aa19.2■□□□□ 0.66
SMAD6-201ENST00000288840 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 FSD1Q9BTV5 496 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 CASTP20810 708 aaKnown RBP19.19■□□□□ 0.66
SMAD6-201ENST00000288840 ESYT1Q9BSJ8 1104 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 NEXNQ0ZGT2 675 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 JAKMIP1Q96N16 626 aaKnown RBP19.19■□□□□ 0.66
SMAD6-201ENST00000288840 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
SMAD6-201ENST00000288840 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
SMAD6-201ENST00000288840 ZSCAN23Q3MJ62 389 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 PRPF40BQ6NWY9 871 aaKnown RBP19.18■□□□□ 0.66
SMAD6-201ENST00000288840 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 RAPGEF4Q8WZA2 1011 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 NEUROD6Q96NK8 337 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 BOLA2Q9H3K6 86 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 PLEKHO1Q53GL0 409 aaPredicted RBP19.18■□□□□ 0.66
SMAD6-201ENST00000288840 RUFY2Q8WXA3 655 aa19.18■□□□□ 0.66
SMAD6-201ENST00000288840 DNAJC2Q99543 621 aaKnown RBP19.18■□□□□ 0.66
SMAD6-201ENST00000288840 KLHL40Q2TBA0 621 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
SMAD6-201ENST00000288840 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 PALD1Q9ULE6 856 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 IQSEC2Q5JU85 1478 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 KCNQ3O43525 872 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 KIAA2012Q0VF49 1180 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 CCDC173Q0VFZ6 552 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 ROBO2Q9HCK4 1378 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
SMAD6-201ENST00000288840 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 MYOM1P52179 1685 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 NBPF7P0C2Y1 421 aaPredicted RBP19.16■□□□□ 0.66
SMAD6-201ENST00000288840 ATP8B2P98198 1209 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 CEBPZQ03701 1054 aaKnown RBP19.16■□□□□ 0.66
SMAD6-201ENST00000288840 CWF19L2Q2TBE0 894 aaKnown RBP19.16■□□□□ 0.66
SMAD6-201ENST00000288840 UNC5CLQ8IV45 518 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 NEO1Q92859 1461 aa19.16■□□□□ 0.66
SMAD6-201ENST00000288840 KIF2CQ99661 725 aa19.15■□□□□ 0.66
SMAD6-201ENST00000288840 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
SMAD6-201ENST00000288840 GORABQ5T7V8 394 aa19.15■□□□□ 0.66
SMAD6-201ENST00000288840 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
SMAD6-201ENST00000288840 MAP3K2Q9Y2U5 619 aa19.14■□□□□ 0.66
SMAD6-201ENST00000288840 HOXC9P31274 260 aa19.14■□□□□ 0.65
SMAD6-201ENST00000288840 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
SMAD6-201ENST00000288840 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
SMAD6-201ENST00000288840 KDM4AO75164 1064 aa19.14■□□□□ 0.65
SMAD6-201ENST00000288840 DDX58O95786 925 aaKnown RBP19.14■□□□□ 0.65
SMAD6-201ENST00000288840 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
SMAD6-201ENST00000288840 CHMLP26374 656 aa19.13■□□□□ 0.65
SMAD6-201ENST00000288840 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
SMAD6-201ENST00000288840 CCDC85AQ96PX6 553 aaPredicted RBP19.13■□□□□ 0.65
SMAD6-201ENST00000288840 LRRC7Q96NW7 1537 aa19.13■□□□□ 0.65
SMAD6-201ENST00000288840 MCM2P49736 904 aa19.13■□□□□ 0.65
SMAD6-201ENST00000288840 FLT4P35916 1363 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 NECAB1Q8N987 351 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 TSPY26PQ9H489 355 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 PHF14O94880 888 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
SMAD6-201ENST00000288840 PIK3R4Q99570 1358 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
SMAD6-201ENST00000288840 H3BQV1 296 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 MBD3O95983 291 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 ZRSR1Q15695 479 aaKnown RBP19.11■□□□□ 0.65
SMAD6-201ENST00000288840 KLHDC4Q8TBB5 520 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 PTPRMP28827 1452 aa19.11■□□□□ 0.65
SMAD6-201ENST00000288840 CAMSAP1Q5T5Y3 1602 aa19.1■□□□□ 0.65
SMAD6-201ENST00000288840 USP44Q9H0E7 712 aa19.1■□□□□ 0.65
SMAD6-201ENST00000288840 RBSNQ9H1K0 784 aa19.1■□□□□ 0.65
SMAD6-201ENST00000288840 SETBP1Q9Y6X0 1596 aa19.1■□□□□ 0.65
SMAD6-201ENST00000288840 PDRG1Q9NUG6 133 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 MROH1Q8NDA8 1641 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
SMAD6-201ENST00000288840 ZNF830Q96NB3 372 aaPredicted RBP19.09■□□□□ 0.65
SMAD6-201ENST00000288840 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.09■□□□□ 0.65
SMAD6-201ENST00000288840 CYP46A1Q9Y6A2 500 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 ATP5J2-PTCD1G3V325 749 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
SMAD6-201ENST00000288840 CAMK4Q16566 473 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms