RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 BCAR3O75815 825 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 PHKG2P15735 406 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 GNAI1P63096 354 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 AFF2P51816 1311 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
PRPF6-201ENST00000266079 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 IFNL2Q8IZJ0 200 aa15.92■□□□□ 0.14
PRPF6-201ENST00000266079 NCAPD2Q15021 1401 aa15.91■□□□□ 0.14
PRPF6-201ENST00000266079 FAM208AQ9UK61 1670 aaKnown RBP15.91■□□□□ 0.14
PRPF6-201ENST00000266079 CALD1Q05682 793 aaKnown RBP15.91■□□□□ 0.14
PRPF6-201ENST00000266079 IFT57Q9NWB7 429 aa15.91■□□□□ 0.14
PRPF6-201ENST00000266079 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
PRPF6-201ENST00000266079 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
PRPF6-201ENST00000266079 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
PRPF6-201ENST00000266079 KCNQ3O43525 872 aa15.9■□□□□ 0.14
PRPF6-201ENST00000266079 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
PRPF6-201ENST00000266079 NECTIN2Q92692 538 aa15.9■□□□□ 0.14
PRPF6-201ENST00000266079 ABCC6O95255 1503 aa15.9■□□□□ 0.14
PRPF6-201ENST00000266079 SLC39A6Q13433 755 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 NFATC2IPQ8NCF5 419 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 BCL9LQ86UU0 1499 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 SLIT2O94813 1529 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 BECN1Q14457 450 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
PRPF6-201ENST00000266079 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 IL16Q14005 1332 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 EXOC5O00471 708 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
PRPF6-201ENST00000266079 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
PRPF6-201ENST00000266079 SYTL4Q96C24 671 aaPredicted RBP15.88■□□□□ 0.13
PRPF6-201ENST00000266079 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
PRPF6-201ENST00000266079 CHL1O00533 1208 aa15.87■□□□□ 0.13
PRPF6-201ENST00000266079 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
PRPF6-201ENST00000266079 PCDH11XQ9BZA7 1347 aa15.87■□□□□ 0.13
PRPF6-201ENST00000266079 PCDH11YQ9BZA8 1340 aa15.87■□□□□ 0.13
PRPF6-201ENST00000266079 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
PRPF6-201ENST00000266079 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
PRPF6-201ENST00000266079 DDB1Q16531 1140 aa15.86■□□□□ 0.13
PRPF6-201ENST00000266079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.133e-8■■■□□ 16.3
PRPF6-201ENST00000266079 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
PRPF6-201ENST00000266079 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
PRPF6-201ENST00000266079 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
PRPF6-201ENST00000266079 CABP4P57796 275 aa15.85■□□□□ 0.13
PRPF6-201ENST00000266079 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
PRPF6-201ENST00000266079 RARSP54136 660 aaKnown RBP15.84■□□□□ 0.13
PRPF6-201ENST00000266079 VPS72Q15906 364 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 FBXO41Q8TF61 875 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 SLKQ9H2G2 1235 aaPredicted RBP15.84■□□□□ 0.13
PRPF6-201ENST00000266079 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
PRPF6-201ENST00000266079 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 CLUAP1Q96AJ1 413 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
PRPF6-201ENST00000266079 CLCN1P35523 988 aa15.83■□□□□ 0.12
PRPF6-201ENST00000266079 NAP1L5Q96NT1 182 aaPredicted RBP15.83■□□□□ 0.12
PRPF6-201ENST00000266079 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
PRPF6-201ENST00000266079 ANTXR1Q9H6X2 564 aa15.83■□□□□ 0.12
PRPF6-201ENST00000266079 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.12
PRPF6-201ENST00000266079 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
PRPF6-201ENST00000266079 XRCC6P12956 609 aaKnown RBP eCLIP15.82■□□□□ 0.123e-6■■■■□ 19.7
PRPF6-201ENST00000266079 VAMP4O75379 141 aa15.82■□□□□ 0.12
PRPF6-201ENST00000266079 SEC24BO95487 1268 aa15.81■□□□□ 0.12
PRPF6-201ENST00000266079 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
PRPF6-201ENST00000266079 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
PRPF6-201ENST00000266079 NRAPQ86VF7 1730 aa15.81■□□□□ 0.12
PRPF6-201ENST00000266079 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
PRPF6-201ENST00000266079 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
PRPF6-201ENST00000266079 HSP90AB1P08238 724 aaKnown RBP15.81■□□□□ 0.12
PRPF6-201ENST00000266079 MARCH10Q8NA82 808 aaPredicted RBP15.81■□□□□ 0.12
PRPF6-201ENST00000266079 FSD2A1L4K1 749 aa15.8■□□□□ 0.12
PRPF6-201ENST00000266079 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
PRPF6-201ENST00000266079 RRP9O43818 475 aaKnown RBP15.8■□□□□ 0.12
PRPF6-201ENST00000266079 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
PRPF6-201ENST00000266079 ZMYND15Q9H091 742 aa15.8■□□□□ 0.12
PRPF6-201ENST00000266079 TRPC5Q9UL62 973 aaPredicted RBP15.8■□□□□ 0.12
PRPF6-201ENST00000266079 THRAP3Q9Y2W1 955 aaKnown RBP15.8■□□□□ 0.12
PRPF6-201ENST00000266079 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
PRPF6-201ENST00000266079 IGHDP01880 384 aa15.79■□□□□ 0.12
PRPF6-201ENST00000266079 ANXA1P04083 346 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
PRPF6-201ENST00000266079 ZNF790Q6PG37 636 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 TTC5Q8N0Z6 440 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
PRPF6-201ENST00000266079 PIP4K2AP48426 406 aaPredicted RBP15.78■□□□□ 0.12
PRPF6-201ENST00000266079 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
PRPF6-201ENST00000266079 BARGINQ6ZT62 677 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 PANK1Q8TE04 598 aa15.78■□□□□ 0.12
PRPF6-201ENST00000266079 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
PRPF6-201ENST00000266079 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.11
PRPF6-201ENST00000266079 NWD2Q9ULI1 1742 aa15.77■□□□□ 0.11
PRPF6-201ENST00000266079 KCNQ2O43526 872 aa15.76■□□□□ 0.11
PRPF6-201ENST00000266079 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
PRPF6-201ENST00000266079 CDCA7Q9BWT1 371 aaPredicted RBP15.76■□□□□ 0.11
PRPF6-201ENST00000266079 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms