RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
CCNE1-201ENST00000262643 SIK1P57059 783 aa28.34■■■□□ 2.13
CCNE1-201ENST00000262643 CCDC184Q52MB2 194 aa28.34■■■□□ 2.13
CCNE1-201ENST00000262643 C5P01031 1676 aa28.34■■■□□ 2.13
CCNE1-201ENST00000262643 PHACTR3Q96KR7 559 aa28.33■■■□□ 2.13
CCNE1-201ENST00000262643 SPON1Q9HCB6 807 aa28.33■■■□□ 2.13
CCNE1-201ENST00000262643 GAS2L2Q8NHY3 880 aa28.32■■■□□ 2.12
CCNE1-201ENST00000262643 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
CCNE1-201ENST00000262643 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
CCNE1-201ENST00000262643 VIRMAQ69YN4 1812 aaKnown RBP28.31■■■□□ 2.12
CCNE1-201ENST00000262643 FCHSD2O94868 740 aa28.3■■■□□ 2.12
CCNE1-201ENST00000262643 TUBGCP6Q96RT7 1819 aa28.3■■■□□ 2.12
CCNE1-201ENST00000262643 ATP6V1AP38606 617 aa28.3■■■□□ 2.12
CCNE1-201ENST00000262643 RBM42Q9BTD8 480 aaKnown RBP28.3■■■□□ 2.12
CCNE1-201ENST00000262643 SLC52A2Q9HAB3 445 aa28.29■■■□□ 2.12
CCNE1-201ENST00000262643 ATF5Q9Y2D1 282 aaPredicted RBP28.29■■■□□ 2.12
CCNE1-201ENST00000262643 PNPLA7Q6ZV29 1317 aa28.29■■■□□ 2.12
CCNE1-201ENST00000262643 MYBBP1AQ9BQG0 1328 aaKnown RBP28.29■■■□□ 2.12
CCNE1-201ENST00000262643 MAP3K5Q99683 1374 aa28.28■■■□□ 2.12
CCNE1-201ENST00000262643 GNAT3A8MTJ3 354 aa28.27■■■□□ 2.12
CCNE1-201ENST00000262643 ITPK1Q13572 414 aa28.26■■■□□ 2.12
CCNE1-201ENST00000262643 C4BP0C0L5 1744 aa28.26■■■□□ 2.11
CCNE1-201ENST00000262643 HMGB2P26583 209 aaKnown RBP28.26■■■□□ 2.11
CCNE1-201ENST00000262643 QSER1Q2KHR3 1735 aa28.25■■■□□ 2.11
CCNE1-201ENST00000262643 PTCD1O75127 700 aaKnown RBP28.25■■■□□ 2.11
CCNE1-201ENST00000262643 LINC00116Q8NCU8 138 aa28.25■■■□□ 2.11
CCNE1-201ENST00000262643 AK7Q96M32 723 aa28.25■■■□□ 2.11
CCNE1-201ENST00000262643 SLC4A9Q96Q91 983 aa28.25■■■□□ 2.11
CCNE1-201ENST00000262643 MTFR1LQ9H019 292 aa28.25■■■□□ 2.11
CCNE1-201ENST00000262643 MSH5O43196 834 aa28.24■■■□□ 2.11
CCNE1-201ENST00000262643 PPP1R1BQ9UD71 204 aaPredicted RBP28.24■■■□□ 2.11
CCNE1-201ENST00000262643 MRC1P22897 1456 aa28.24■■■□□ 2.11
CCNE1-201ENST00000262643 ADAMTS7Q9UKP4 1686 aa28.23■■■□□ 2.11
CCNE1-201ENST00000262643 MRS2Q9HD23 443 aa28.23■■■□□ 2.11
CCNE1-201ENST00000262643 IL17REQ8NFR9 667 aa28.22■■■□□ 2.11
CCNE1-201ENST00000262643 SLC39A6Q13433 755 aa28.21■■■□□ 2.11
CCNE1-201ENST00000262643 COL23A1Q86Y22 540 aaPredicted RBP28.21■■■□□ 2.11
CCNE1-201ENST00000262643 NEFMP07197 916 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 PTGER2P43116 358 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 SMIM5Q71RC9 77 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 PHF14O94880 888 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 TEFQ10587 303 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 AMIGO3Q86WK7 504 aa28.19■■■□□ 2.1
CCNE1-201ENST00000262643 SLC16A10Q8TF71 515 aa28.18■■■□□ 2.1
CCNE1-201ENST00000262643 GNPATO15228 680 aa28.16■■■□□ 2.1
CCNE1-201ENST00000262643 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
CCNE1-201ENST00000262643 RTF1Q92541 710 aaKnown RBP28.16■■■□□ 2.1
CCNE1-201ENST00000262643 PLEKHF1Q96S99 279 aa28.16■■■□□ 2.1
CCNE1-201ENST00000262643 UBR3Q6ZT12 1888 aa28.16■■■□□ 2.1
CCNE1-201ENST00000262643 MCM10Q7L590 875 aa28.14■■■□□ 2.1
CCNE1-201ENST00000262643 FLAD1Q8NFF5 587 aa28.14■■■□□ 2.1
CCNE1-201ENST00000262643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.14■■■□□ 2.09
CCNE1-201ENST00000262643 CEMIPQ8WUJ3 1361 aa28.14■■■□□ 2.09
CCNE1-201ENST00000262643 SGIP1Q9BQI5 828 aa28.13■■■□□ 2.09
CCNE1-201ENST00000262643 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
CCNE1-201ENST00000262643 DCTN1Q14203 1278 aa28.13■■■□□ 2.09
CCNE1-201ENST00000262643 PNNQ9H307 717 aaKnown RBP28.13■■■□□ 2.09
CCNE1-201ENST00000262643 MAPK8IP3Q9UPT6 1336 aa28.12■■■□□ 2.09
CCNE1-201ENST00000262643 FAM9BQ8IZU0 186 aa28.12■■■□□ 2.09
CCNE1-201ENST00000262643 TTC5Q8N0Z6 440 aa28.12■■■□□ 2.09
CCNE1-201ENST00000262643 MSL1Q68DK7 614 aa28.11■■■□□ 2.09
CCNE1-201ENST00000262643 SSFA2P28290 1259 aa28.11■■■□□ 2.09
CCNE1-201ENST00000262643 SIPA1L3O60292 1781 aaPredicted RBP28.1■■■□□ 2.09
CCNE1-201ENST00000262643 KCPQ6ZWJ8 1503 aa28.1■■■□□ 2.09
CCNE1-201ENST00000262643 TJP1Q07157 1748 aa28.1■■■□□ 2.09
CCNE1-201ENST00000262643 CNTNAP4Q9C0A0 1308 aa28.09■■■□□ 2.09
CCNE1-201ENST00000262643 WDR43Q15061 677 aaKnown RBP eCLIP28.09■■■□□ 2.09
CCNE1-201ENST00000262643 DNAJC10Q8IXB1 793 aa28.09■■■□□ 2.09
CCNE1-201ENST00000262643 RTCBQ9Y3I0 505 aaKnown RBP28.09■■■□□ 2.09
CCNE1-201ENST00000262643 DLG5Q8TDM6 1919 aa28.09■■■□□ 2.09
CCNE1-201ENST00000262643 MYH14Q7Z406 1995 aaKnown RBP28.08■■■□□ 2.09
CCNE1-201ENST00000262643 POLD1P28340 1107 aa28.08■■■□□ 2.09
CCNE1-201ENST00000262643 ARXQ96QS3 562 aa28.08■■■□□ 2.09
CCNE1-201ENST00000262643 CRKLP46109 303 aaKnown RBP28.08■■■□□ 2.08
CCNE1-201ENST00000262643 NFE2L2Q16236 605 aa28.08■■■□□ 2.08
CCNE1-201ENST00000262643 RC3H1Q5TC82 1133 aaKnown RBP28.08■■■□□ 2.08
CCNE1-201ENST00000262643 ZNF790Q6PG37 636 aa28.08■■■□□ 2.08
CCNE1-201ENST00000262643 BTBD11A6QL63 1104 aa28.07■■■□□ 2.08
CCNE1-201ENST00000262643 HTATSF1O43719 755 aaKnown RBP28.07■■■□□ 2.08
CCNE1-201ENST00000262643 UBR2Q8IWV8 1755 aa28.06■■■□□ 2.08
CCNE1-201ENST00000262643 CCDC146Q8IYE0 955 aa28.05■■■□□ 2.08
CCNE1-201ENST00000262643 TRAPPC3LQ5T215 181 aa28.04■■■□□ 2.08
CCNE1-201ENST00000262643 ZNF496Q96IT1 587 aaPredicted RBP28.04■■■□□ 2.08
CCNE1-201ENST00000262643 FHDC1Q9C0D6 1143 aaPredicted RBP28.04■■■□□ 2.08
CCNE1-201ENST00000262643 CICQ96RK0 1608 aaPredicted RBP28.04■■■□□ 2.08
CCNE1-201ENST00000262643 COL24A1Q17RW2 1714 aa28.04■■■□□ 2.08
CCNE1-201ENST00000262643 RPS6KA4O75676 772 aa28.03■■■□□ 2.08
CCNE1-201ENST00000262643 ADAMTS8Q9UP79 889 aa28.03■■■□□ 2.08
CCNE1-201ENST00000262643 KCNQ3O43525 872 aa28.02■■■□□ 2.08
CCNE1-201ENST00000262643 VSIG10Q8N0Z9 540 aa28.02■■■□□ 2.08
CCNE1-201ENST00000262643 KLHL34Q8N239 644 aa28.02■■■□□ 2.08
CCNE1-201ENST00000262643 ARHGEF1Q92888 912 aaKnown RBP28.01■■■□□ 2.07
CCNE1-201ENST00000262643 CYP19A1P11511 503 aaPredicted RBP28.01■■■□□ 2.07
CCNE1-201ENST00000262643 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.07
CCNE1-201ENST00000262643 THUMPD2Q9BTF0 503 aaKnown RBP28.01■■■□□ 2.07
CCNE1-201ENST00000262643 PNISRQ8TF01 805 aaKnown RBP28■■■□□ 2.07
CCNE1-201ENST00000262643 CCDC87Q9NVE4 849 aa28■■■□□ 2.07
CCNE1-201ENST00000262643 FMNL2Q96PY5 1086 aa27.99■■■□□ 2.07
CCNE1-201ENST00000262643 HEG1Q9ULI3 1381 aa27.99■■■□□ 2.07
CCNE1-201ENST00000262643 ADRA2BP18089 450 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms