RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TEFQ10587 303 aa27.11■■□□□ 1.93
RTCA-201ENST00000260563 TRIM35Q9UPQ4 493 aa27.11■■□□□ 1.93
RTCA-201ENST00000260563 LY75O60449 1722 aa27.1■■□□□ 1.93
RTCA-201ENST00000260563 PTF1AQ7RTS3 328 aa27.1■■□□□ 1.93
RTCA-201ENST00000260563 NGEFQ8N5V2 710 aa27.1■■□□□ 1.93
RTCA-201ENST00000260563 KDM3BQ7LBC6 1761 aa27.09■■□□□ 1.93
RTCA-201ENST00000260563 SF3B2Q13435 895 aaKnown RBP27.09■■□□□ 1.93
RTCA-201ENST00000260563 NFATC2IPQ8NCF5 419 aa27.09■■□□□ 1.93
RTCA-201ENST00000260563 NCBP3Q53F19 620 aaKnown RBP27.08■■□□□ 1.93
RTCA-201ENST00000260563 PIGBQ92521 554 aa27.08■■□□□ 1.93
RTCA-201ENST00000260563 THUMPD2Q9BTF0 503 aaKnown RBP27.08■■□□□ 1.93
RTCA-201ENST00000260563 UBR2Q8IWV8 1755 aa27.08■■□□□ 1.93
RTCA-201ENST00000260563 CCDC27Q2M243 656 aa27.07■■□□□ 1.92
RTCA-201ENST00000260563 CCDC125Q86Z20 511 aa27.06■■□□□ 1.92
RTCA-201ENST00000260563 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
RTCA-201ENST00000260563 APBA3O96018 575 aa27.04■■□□□ 1.92
RTCA-201ENST00000260563 CENPBP07199 599 aaPredicted RBP27.04■■□□□ 1.92
RTCA-201ENST00000260563 RREB1Q92766 1687 aa27.02■■□□□ 1.92
RTCA-201ENST00000260563 CALD1Q05682 793 aaKnown RBP27.01■■□□□ 1.91
RTCA-201ENST00000260563 WWC1Q8IX03 1113 aa27.01■■□□□ 1.91
RTCA-201ENST00000260563 PALLDQ8WX93 1383 aa27.01■■□□□ 1.91
RTCA-201ENST00000260563 ZNF521Q96K83 1311 aa27.01■■□□□ 1.91
RTCA-201ENST00000260563 BTBD11A6QL63 1104 aa27■■□□□ 1.91
RTCA-201ENST00000260563 BAG6P46379 1132 aa27■■□□□ 1.91
RTCA-201ENST00000260563 TAF7Q15545 349 aaPredicted RBP27■■□□□ 1.91
RTCA-201ENST00000260563 SMARCC1Q92922 1105 aaPredicted RBP27■■□□□ 1.91
RTCA-201ENST00000260563 ZNF831Q5JPB2 1677 aa26.99■■□□□ 1.91
RTCA-201ENST00000260563 ATG3Q9NT62 314 aa26.99■■□□□ 1.91
RTCA-201ENST00000260563 ASAP1Q9ULH1 1129 aa26.99■■□□□ 1.91
RTCA-201ENST00000260563 KCPQ6ZWJ8 1503 aa26.98■■□□□ 1.91
RTCA-201ENST00000260563 TAF1LQ8IZX4 1826 aa26.97■■□□□ 1.91
RTCA-201ENST00000260563 PLSCR1O15162 318 aa26.97■■□□□ 1.91
RTCA-201ENST00000260563 SLC39A6Q13433 755 aa26.97■■□□□ 1.91
RTCA-201ENST00000260563 TTC5Q8N0Z6 440 aa26.97■■□□□ 1.91
RTCA-201ENST00000260563 CICQ96RK0 1608 aaPredicted RBP26.97■■□□□ 1.91
RTCA-201ENST00000260563 C5P01031 1676 aa26.96■■□□□ 1.91
RTCA-201ENST00000260563 NUP188Q5SRE5 1749 aa26.96■■□□□ 1.91
RTCA-201ENST00000260563 ZNF790Q6PG37 636 aa26.95■■□□□ 1.91
RTCA-201ENST00000260563 TJP1Q07157 1748 aa26.95■■□□□ 1.9
RTCA-201ENST00000260563 TSPYL4Q9UJ04 414 aa26.95■■□□□ 1.9
RTCA-201ENST00000260563 LAS1LQ9Y4W2 734 aaKnown RBP26.95■■□□□ 1.9
RTCA-201ENST00000260563 EN1Q05925 392 aaPredicted RBP26.94■■□□□ 1.9
RTCA-201ENST00000260563 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
RTCA-201ENST00000260563 IFT57Q9NWB7 429 aa26.94■■□□□ 1.9
RTCA-201ENST00000260563 BABAM1Q9NWV8 329 aa26.94■■□□□ 1.9
RTCA-201ENST00000260563 COL5A3P25940 1745 aaPredicted RBP26.93■■□□□ 1.9
RTCA-201ENST00000260563 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
RTCA-201ENST00000260563 CFAP44Q96MT7 982 aa26.93■■□□□ 1.9
RTCA-201ENST00000260563 MIS18AQ9NYP9 233 aa26.93■■□□□ 1.9
RTCA-201ENST00000260563 LAMB4A4D0S4 1761 aa26.92■■□□□ 1.9
RTCA-201ENST00000260563 GNAI1P63096 354 aa26.92■■□□□ 1.9
RTCA-201ENST00000260563 GOLGA2Q08379 1002 aa26.92■■□□□ 1.9
RTCA-201ENST00000260563 IL16Q14005 1332 aa26.92■■□□□ 1.9
RTCA-201ENST00000260563 RBM42Q9BTD8 480 aaKnown RBP26.9■■□□□ 1.9
RTCA-201ENST00000260563 LOC102724428A0A0B4J2F2 783 aa26.9■■□□□ 1.9
RTCA-201ENST00000260563 CHL1O00533 1208 aa26.9■■□□□ 1.9
RTCA-201ENST00000260563 PTCD1O75127 700 aaKnown RBP26.9■■□□□ 1.9
RTCA-201ENST00000260563 SIK1P57059 783 aa26.9■■□□□ 1.9
RTCA-201ENST00000260563 EZH2Q15910 746 aaKnown RBP26.9■■□□□ 1.9
RTCA-201ENST00000260563 CAMKK2Q96RR4 588 aa26.9■■□□□ 1.9
RTCA-201ENST00000260563 KCNQ3O43525 872 aa26.89■■□□□ 1.89
RTCA-201ENST00000260563 ZNF853P0CG23 659 aa26.89■■□□□ 1.89
RTCA-201ENST00000260563 TXNRD1Q16881 649 aa26.89■■□□□ 1.89
RTCA-201ENST00000260563 CDCA7LQ96GN5 454 aa26.89■■□□□ 1.89
RTCA-201ENST00000260563 CCNL1Q9UK58 526 aaPredicted RBP26.89■■□□□ 1.89
RTCA-201ENST00000260563 SOCS7O14512 581 aa26.88■■□□□ 1.89
RTCA-201ENST00000260563 SLC27A3Q5K4L6 730 aa26.88■■□□□ 1.89
RTCA-201ENST00000260563 FMNL2Q96PY5 1086 aa26.88■■□□□ 1.89
RTCA-201ENST00000260563 MBIPQ9NS73 344 aa26.87■■□□□ 1.89
RTCA-201ENST00000260563 ZNF496Q96IT1 587 aaPredicted RBP26.86■■□□□ 1.89
RTCA-201ENST00000260563 HEG1Q9ULI3 1381 aa26.86■■□□□ 1.89
RTCA-201ENST00000260563 ATP6V1AP38606 617 aa26.85■■□□□ 1.89
RTCA-201ENST00000260563 C4BP0C0L5 1744 aa26.85■■□□□ 1.89
RTCA-201ENST00000260563 E9PSI1 815 aa26.85■■□□□ 1.89
RTCA-201ENST00000260563 SLFN5Q08AF3 891 aa26.85■■□□□ 1.89
RTCA-201ENST00000260563 PROM2Q8N271 834 aa26.84■■□□□ 1.89
RTCA-201ENST00000260563 SPINK5Q9NQ38 1064 aaPredicted RBP26.84■■□□□ 1.89
RTCA-201ENST00000260563 EIF4A1P60842 406 aaKnown RBP26.83■■□□□ 1.89
RTCA-201ENST00000260563 VSIG10Q8N0Z9 540 aa26.83■■□□□ 1.89
RTCA-201ENST00000260563 SLC4A9Q96Q91 983 aa26.83■■□□□ 1.89
RTCA-201ENST00000260563 KCNQ4P56696 695 aa26.82■■□□□ 1.88
RTCA-201ENST00000260563 TSR2Q969E8 191 aaKnown RBP26.82■■□□□ 1.88
RTCA-201ENST00000260563 MYH16Q9H6N6 1097 aa26.82■■□□□ 1.88
RTCA-201ENST00000260563 LRRC4BQ9NT99 713 aa26.82■■□□□ 1.88
RTCA-201ENST00000260563 FANCIQ9NVI1 1328 aa26.81■■□□□ 1.88
RTCA-201ENST00000260563 TRMT2AQ8IZ69 625 aaKnown RBP26.8■■□□□ 1.88
RTCA-201ENST00000260563 TUBGCP6Q96RT7 1819 aa26.8■■□□□ 1.88
RTCA-201ENST00000260563 HMGB2P26583 209 aaKnown RBP26.8■■□□□ 1.88
RTCA-201ENST00000260563 ITPK1Q13572 414 aa26.8■■□□□ 1.88
RTCA-201ENST00000260563 SNRPA1P09661 255 aaKnown RBP26.79■■□□□ 1.88
RTCA-201ENST00000260563 DUSP27Q5VZP5 1158 aa26.79■■□□□ 1.88
RTCA-201ENST00000260563 MYH14Q7Z406 1995 aaKnown RBP26.79■■□□□ 1.88
RTCA-201ENST00000260563 UBR3Q6ZT12 1888 aa26.77■■□□□ 1.88
RTCA-201ENST00000260563 DNAJC10Q8IXB1 793 aa26.77■■□□□ 1.88
RTCA-201ENST00000260563 QSER1Q2KHR3 1735 aa26.77■■□□□ 1.88
RTCA-201ENST00000260563 LINC00116Q8NCU8 138 aa26.76■■□□□ 1.87
RTCA-201ENST00000260563 TEX13AQ9BXU3 409 aaPredicted RBP26.76■■□□□ 1.87
RTCA-201ENST00000260563 GIGYF1O75420 1035 aaPredicted RBP26.75■■□□□ 1.87
RTCA-201ENST00000260563 PRAMEF22A3QJZ6 481 aa26.75■■□□□ 1.87
RTCA-201ENST00000260563 KRT24Q2M2I5 525 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms