RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 ANKRD45Q5TZF3 282 aa20.3■□□□□ 0.84
FDX1-201ENST00000260270 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
FDX1-201ENST00000260270 USP26Q9BXU7 913 aa20.29■□□□□ 0.84
FDX1-201ENST00000260270 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
FDX1-201ENST00000260270 EYA1Q99502 592 aa20.29■□□□□ 0.84
FDX1-201ENST00000260270 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
FDX1-201ENST00000260270 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
FDX1-201ENST00000260270 HOXC9P31274 260 aa20.28■□□□□ 0.84
FDX1-201ENST00000260270 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
FDX1-201ENST00000260270 C5P01031 1676 aa20.27■□□□□ 0.84
FDX1-201ENST00000260270 RABEP1Q15276 862 aa20.27■□□□□ 0.84
FDX1-201ENST00000260270 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
FDX1-201ENST00000260270 PAPPAQ13219 1627 aa20.26■□□□□ 0.83
FDX1-201ENST00000260270 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
FDX1-201ENST00000260270 MLECQ14165 292 aa20.25■□□□□ 0.83
FDX1-201ENST00000260270 C1orf115Q9H7X2 142 aa20.25■□□□□ 0.83
FDX1-201ENST00000260270 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
FDX1-201ENST00000260270 MCM10Q7L590 875 aa20.24■□□□□ 0.83
FDX1-201ENST00000260270 RGPD5Q99666 1765 aa20.23■□□□□ 0.83
FDX1-201ENST00000260270 UBR2Q8IWV8 1755 aa20.22■□□□□ 0.83
FDX1-201ENST00000260270 MEIS3Q99687 375 aa20.22■□□□□ 0.83
FDX1-201ENST00000260270 GOLGA6L3A6NEY3 463 aa20.21■□□□□ 0.83
FDX1-201ENST00000260270 SKOR2Q2VWA4 1001 aaPredicted RBP20.21■□□□□ 0.83
FDX1-201ENST00000260270 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
FDX1-201ENST00000260270 POLA2Q14181 598 aa20.21■□□□□ 0.83
FDX1-201ENST00000260270 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
FDX1-201ENST00000260270 XRCC6P12956 609 aaKnown RBP eCLIP20.2■□□□□ 0.82
FDX1-201ENST00000260270 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
FDX1-201ENST00000260270 SDSP20132 328 aa20.19■□□□□ 0.82
FDX1-201ENST00000260270 TRAK2O60296 914 aa20.19■□□□□ 0.82
FDX1-201ENST00000260270 ARID3AQ99856 593 aa20.19■□□□□ 0.82
FDX1-201ENST00000260270 HMMRO75330 724 aa20.18■□□□□ 0.82
FDX1-201ENST00000260270 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
FDX1-201ENST00000260270 ATP8B2P98198 1209 aa20.18■□□□□ 0.82
FDX1-201ENST00000260270 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
FDX1-201ENST00000260270 ANAPC15P60006 121 aa20.17■□□□□ 0.82
FDX1-201ENST00000260270 IP6K1Q92551 441 aa20.17■□□□□ 0.82
FDX1-201ENST00000260270 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
FDX1-201ENST00000260270 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
FDX1-201ENST00000260270 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 SSH3Q8TE77 659 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 DCCP43146 1447 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 PDE1AP54750 535 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 CCDC30Q5VVM6 783 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 G2E3Q7L622 706 aa20.16■□□□□ 0.82
FDX1-201ENST00000260270 FOXO3O43524 673 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 MTX1Q13505 466 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 GNAI3P08754 354 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 SRCIN1Q9C0H9 1055 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 MRE11P49959 708 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
FDX1-201ENST00000260270 GNAI2P04899 355 aa20.14■□□□□ 0.82
FDX1-201ENST00000260270 PXDNQ92626 1479 aa20.14■□□□□ 0.82
FDX1-201ENST00000260270 FLIIQ13045 1269 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 COL15A1P39059 1388 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 ELL2O00472 640 aaPredicted RBP20.14■□□□□ 0.81
FDX1-201ENST00000260270 KCNA6P17658 529 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 CUL4AQ13619 759 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
FDX1-201ENST00000260270 TAF7Q15545 349 aaPredicted RBP20.13■□□□□ 0.81
FDX1-201ENST00000260270 UTYO14607 1347 aa20.12■□□□□ 0.81
FDX1-201ENST00000260270 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
FDX1-201ENST00000260270 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
FDX1-201ENST00000260270 PODXL2Q9NZ53 605 aa20.12■□□□□ 0.81
FDX1-201ENST00000260270 ARFGEF2Q9Y6D5 1785 aa20.12■□□□□ 0.81
FDX1-201ENST00000260270 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
FDX1-201ENST00000260270 RRP9O43818 475 aaKnown RBP20.11■□□□□ 0.81
FDX1-201ENST00000260270 REC8O95072 547 aa20.11■□□□□ 0.81
FDX1-201ENST00000260270 SHANK3Q9BYB0 1731 aa20.11■□□□□ 0.81
FDX1-201ENST00000260270 XIRP1Q702N8 1843 aaKnown RBP20.11■□□□□ 0.81
FDX1-201ENST00000260270 KLHL40Q2TBA0 621 aa20.11■□□□□ 0.81
FDX1-201ENST00000260270 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
FDX1-201ENST00000260270 ERC2O15083 957 aa20.1■□□□□ 0.81
FDX1-201ENST00000260270 TMEM94Q12767 1356 aa20.1■□□□□ 0.81
FDX1-201ENST00000260270 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
FDX1-201ENST00000260270 ABCA3Q99758 1704 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 ZNF445P59923 1031 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 USP44Q9H0E7 712 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 NPHP4O75161 1426 aaPredicted RBP20.09■□□□□ 0.81
FDX1-201ENST00000260270 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
FDX1-201ENST00000260270 MCM2P49736 904 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 NUCB2P80303 420 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 SNRKQ9NRH2 765 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
FDX1-201ENST00000260270 JCADQ9P266 1359 aa20.09■□□□□ 0.81
FDX1-201ENST00000260270 CEBPAP49715 358 aaPredicted RBP20.08■□□□□ 0.81
FDX1-201ENST00000260270 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.81
FDX1-201ENST00000260270 TJP1Q07157 1748 aa20.08■□□□□ 0.81
FDX1-201ENST00000260270 ADCY9O60503 1353 aa20.08■□□□□ 0.8
FDX1-201ENST00000260270 EIF4A1P60842 406 aaKnown RBP20.08■□□□□ 0.8
FDX1-201ENST00000260270 KCNB2Q92953 911 aa20.08■□□□□ 0.8
FDX1-201ENST00000260270 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
FDX1-201ENST00000260270 TRIM44Q96DX7 344 aaPredicted RBP20.07■□□□□ 0.8
FDX1-201ENST00000260270 CLCN1P35523 988 aa20.06■□□□□ 0.8
FDX1-201ENST00000260270 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
FDX1-201ENST00000260270 ESYT1Q9BSJ8 1104 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms