RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 CARD14Q9BXL6 1004 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
MRPL47-201ENST00000259038 NNTQ13423 1086 aa11.74□□□□□ -0.53
MRPL47-201ENST00000259038 VASH1Q7L8A9 365 aaPredicted RBP11.74□□□□□ -0.53
MRPL47-201ENST00000259038 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
MRPL47-201ENST00000259038 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
MRPL47-201ENST00000259038 NPATQ14207 1427 aa11.73□□□□□ -0.53
MRPL47-201ENST00000259038 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
MRPL47-201ENST00000259038 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
MRPL47-201ENST00000259038 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
MRPL47-201ENST00000259038 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
MRPL47-201ENST00000259038 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
MRPL47-201ENST00000259038 CAPN5O15484 640 aaPredicted RBP11.72□□□□□ -0.53
MRPL47-201ENST00000259038 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
MRPL47-201ENST00000259038 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
MRPL47-201ENST00000259038 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
MRPL47-201ENST00000259038 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
MRPL47-201ENST00000259038 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
MRPL47-201ENST00000259038 GRM5P41594 1212 aa11.7□□□□□ -0.54
MRPL47-201ENST00000259038 TRIM52Q96A61 297 aa11.7□□□□□ -0.54
MRPL47-201ENST00000259038 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
MRPL47-201ENST00000259038 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
MRPL47-201ENST00000259038 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
MRPL47-201ENST00000259038 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
MRPL47-201ENST00000259038 ADAM32Q8TC27 787 aa11.69□□□□□ -0.54
MRPL47-201ENST00000259038 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
MRPL47-201ENST00000259038 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
MRPL47-201ENST00000259038 PLXNC1O60486 1568 aa11.68□□□□□ -0.54
MRPL47-201ENST00000259038 HSPA1LP34931 641 aa11.68□□□□□ -0.54
MRPL47-201ENST00000259038 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
MRPL47-201ENST00000259038 ATP13A2Q9NQ11 1180 aa11.68□□□□□ -0.54
MRPL47-201ENST00000259038 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
MRPL47-201ENST00000259038 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
MRPL47-201ENST00000259038 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
MRPL47-201ENST00000259038 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 ZBBXA8MT70 800 aa11.67□□□□□ -0.54
MRPL47-201ENST00000259038 WDR4P57081 412 aaKnown RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 MCCD1P59942 119 aaPredicted RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 MTMR14Q8NCE2 650 aa11.67□□□□□ -0.54
MRPL47-201ENST00000259038 KIFC2Q96AC6 838 aa11.67□□□□□ -0.54
MRPL47-201ENST00000259038 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
MRPL47-201ENST00000259038 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
MRPL47-201ENST00000259038 FSHRP23945 695 aa11.66□□□□□ -0.54
MRPL47-201ENST00000259038 DHX9Q08211 1270 aaKnown RBP11.66□□□□□ -0.54
MRPL47-201ENST00000259038 GGT6Q6P531 493 aa11.66□□□□□ -0.54
MRPL47-201ENST00000259038 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
MRPL47-201ENST00000259038 A2MP01023 1474 aa11.65□□□□□ -0.54
MRPL47-201ENST00000259038 CCDC18Q5T9S5 1454 aa11.65□□□□□ -0.54
MRPL47-201ENST00000259038 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
MRPL47-201ENST00000259038 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 TIMP2P16035 220 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 CCDC116Q8IYX3 515 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
MRPL47-201ENST00000259038 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
MRPL47-201ENST00000259038 C11orf95C9JLR9 678 aaPredicted RBP11.63□□□□□ -0.55
MRPL47-201ENST00000259038 SCARF1Q14162 830 aa11.63□□□□□ -0.55
MRPL47-201ENST00000259038 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
MRPL47-201ENST00000259038 OCSTAMPQ9BR26 566 aa11.63□□□□□ -0.55
MRPL47-201ENST00000259038 KLF16Q9BXK1 252 aaPredicted RBP11.63□□□□□ -0.55
MRPL47-201ENST00000259038 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
MRPL47-201ENST00000259038 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
MRPL47-201ENST00000259038 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
MRPL47-201ENST00000259038 ZIC2O95409 532 aaPredicted RBP11.62□□□□□ -0.55
MRPL47-201ENST00000259038 NR1H3Q13133 447 aa11.62□□□□□ -0.55
MRPL47-201ENST00000259038 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
MRPL47-201ENST00000259038 A2ML1A8K2U0 1454 aa11.62□□□□□ -0.55
MRPL47-201ENST00000259038 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
MRPL47-201ENST00000259038 NR3C2P08235 984 aa11.61□□□□□ -0.55
MRPL47-201ENST00000259038 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
MRPL47-201ENST00000259038 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
MRPL47-201ENST00000259038 UPP2O95045 317 aa11.6□□□□□ -0.55
MRPL47-201ENST00000259038 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
MRPL47-201ENST00000259038 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
MRPL47-201ENST00000259038 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
MRPL47-201ENST00000259038 ITPKCQ96DU7 683 aa11.59□□□□□ -0.55
MRPL47-201ENST00000259038 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
MRPL47-201ENST00000259038 CFDP1Q9UEE9 299 aaPredicted RBP11.59□□□□□ -0.55
MRPL47-201ENST00000259038 STRCP1A6NGW2 1772 aa11.59□□□□□ -0.55
MRPL47-201ENST00000259038 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.55
MRPL47-201ENST00000259038 TOM1O60784 492 aa11.58□□□□□ -0.56
MRPL47-201ENST00000259038 FBXO45P0C2W1 286 aa11.58□□□□□ -0.56
MRPL47-201ENST00000259038 CPS1P31327 1500 aa11.58□□□□□ -0.56
MRPL47-201ENST00000259038 POTECB2RU33 542 aa11.57□□□□□ -0.56
MRPL47-201ENST00000259038 PPP1R26Q5T8A7 1209 aaPredicted RBP11.57□□□□□ -0.56
MRPL47-201ENST00000259038 MRPL14Q6P1L8 145 aaKnown RBP11.57□□□□□ -0.56
MRPL47-201ENST00000259038 PCDHB9Q9Y5E1 797 aa11.57□□□□□ -0.56
MRPL47-201ENST00000259038 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
MRPL47-201ENST00000259038 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
MRPL47-201ENST00000259038 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
MRPL47-201ENST00000259038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms